FFCP PHASE1:Hg19::chr16:54962945..54962967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=37078 | |HGNC=37078 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000560208_5end | |association_with_transcript=93bp_to_ENST00000560208_5end | ||
|cluster_id=chr16:54962945..54962967,- | |||
|description=CAGE_peak_4_at_CRNDE_5end | |description=CAGE_peak_4_at_CRNDE_5end | ||
|id=chr16:54962945..54962967,- | |id=chr16:54962945..54962967,- | ||
|ontology_enrichment_celltype=CL:0000066!1.25e-08!254 | |ontology_enrichment_celltype=CL:0000066!1.25e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0000153;3.14e-07;9!CL:0000447;3.14e-07;9!CL:0002620;4.19e-07;23!CL:0000214;6.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.13e-07,9;CL:0000447,4.13e-07,9;CL:0000214,7.66e-07,3;CL:0002620,8.24e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.48e-07!106;DOID:162!1.52e-07!235;DOID:0050687!1.69e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:17;1.69e-09;5!DOID:450;1.69e-09;5!DOID:66;1.69e-09;5!DOID:423;1.69e-09;5!DOID:0080000;1.69e-09;5!DOID:11722;1.69e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.36e-09,5;DOID:450,4.36e-09,5;DOID:66,4.36e-09,5;DOID:423,4.36e-09,5;DOID:0080000,4.36e-09,5;DOID:11722,4.36e-09,5;DOID:7,2.61e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;2.37e-07;13!UBERON:0006915;6.73e-07;3!UBERON:0007616;6.73e-07;3!UBERON:0002217;6.73e-07;3!UBERON:0002018;6.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,1.56e-07,13;UBERON:0006915,7.66e-07,3;UBERON:0007616,7.66e-07,3;UBERON:0002217,7.66e-07,3;UBERON:0002018,7.66e-07,3 | |||
|phase1_expression=1.63510541343501,0.856402095563933,0,3.00219895059391,0,0,5.06599756336621,0,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0,0,0.331397375727916,0,0,0,0,1.10808952269109,0.612002073732759,2.19418305034661,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,2.43806866313962,0,0.511450247374121,1.44575660953827,3.00802746381534,1.15877215168659,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.506522046658319,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0.622422070799533,0,0.326923806226917,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.352303495931295,0,0.421352420106746,0.816616685019573,0,1.34323515528495,0,0.247266929278557,0,0,0,0.375355559615893,0,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,1.07633781413317,2.34913127700424,3.39091041855299,2.10063767259082,1.23663035086127,1.28820270022815,1.30281799432113,1.0126579934476,2.04617710838517,0.757301322732344,1.56484827691909,0.646584227275248,1.42003837006646,0.503760491138201,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.464775771478074,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.674338760312407,0.723033089650446,0.661763836394364,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0.8231480226628,0,0,0,0.590789906681404,0.441463099414651,1.22988438543114,0.343135620597051,0.548751427043128,1.1240175325762,0.502644862058154,0.648119116109707,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.671928512795438,0.141775097242386,0.626909658919938,0.581267877027924,0.766765358330422,0,0,0,0,0,0.698476837213859,0,1.17217447210047,0,0.719792448923265,0,1.71495859578347,0.224262168690721,0,0.07333828582095,0.775630294546667,0,0.845302752556,0,0,0.257207374262142,1.41849132023278,1.3321108950805,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0.958499421966331,0,0,0.144781306667579,0,0.716243852959582,0,0.394061520403854,0.215627574859517,0.256686072559497,0,1.30139853857622,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,1.05427273493442,1.80567659836631,2.27407504055985,0,1.32845119707087,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0.744323423456331,0.920771839728375,1.96462066103151,0.128139149255701,2.55853624533352,0.160853921143607,0,0.308419387605311,1.06537035187876,0.0821271560138091,0,0.232420756919918,1.32945394550784,0.40101294060657,0.184161977871793,0.114814448164607,0,0,0,0.385076685522074,0.784349769176855,1.46139224653261,0.633309773357254,0,0.170093705276516,0,1.54227252690289,0.541892875087706,1.50506932156456,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.515205058238611,0.915694648183434,1.65018999841176,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0,0.340906509664404,0.267096106940212,0.826424576804891,1.15314040419064,0.638063562472921,1.6185244936888,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.392996164052485,0,0,2.11107635297664,3.29294892959902,0,0.699869440489966,0.384888450902048,0,0,0.282431402330337,0.43050537267123,0,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.318852545457645,0,0,0.423347165447766,1.62310970137278,0.280797178113459,0,0.626719583092093,0,0,0.321176150207399,0.403599414382095,0.425846237690326,0.687010689511529,0.921722292925374,0,0.834245708559542,0.390776190804081,0,0,0,0.33307196799782,0,0.561421621224659,0.293016358543788,0.121360521749513,0,0.568272293612826,0,0.296964680832639,0,0,0.140669416410513,0.445234820091624,0.659215496907038,0.211125408127993,1.19548792950642,0,0.503865495708552,1.22722419002586,0,3.73247505194169,0.269605053441981,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,3.38556089410803,6.29711999972609,2.89999830173917,0,1.77977555204936,0.236387681767936,0.689486746482929,0.291604613383254,0.347249989866585,0,0.60298219312704,1.52581736317083,0.884634079449797,0,0,0.8715077081519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| ||
|short_description=p4@CRNDE | |short_description=p4@CRNDE | ||
}} | }} |
Latest revision as of 23:30, 16 September 2015
Short description: | p4@CRNDE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CRNDE_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000560208_5end |
EntrezGene: | NA |
HGNC: | 37078 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.13e-07 | 9 |
carbohydrate secreting cell | 4.13e-07 | 9 |
synovial cell | 7.66e-07 | 3 |
skin fibroblast | 8.24e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of nervous system | 1.56e-07 | 13 |
stratified squamous epithelium | 7.66e-07 | 3 |
layer of synovial tissue | 7.66e-07 | 3 |
synovial joint | 7.66e-07 | 3 |
synovial membrane of synovial joint | 7.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.36e-09 | 5 |
myotonic disease | 4.36e-09 | 5 |
muscle tissue disease | 4.36e-09 | 5 |
myopathy | 4.36e-09 | 5 |
muscular disease | 4.36e-09 | 5 |
myotonic dystrophy | 4.36e-09 | 5 |
disease of anatomical entity | 2.61e-07 | 39 |