FFCP PHASE1:Hg19::chr10:35379499..35379520,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:35379499..35379520,-
|short_description=p2@CUL2
|description=CAGE_peak_2_at_CUL2_5end
|association_with_transcript=25bp_to_uc001ixw.2_5end
|EntrezGene=84...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8453 | |EntrezGene=8453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2552 | |HGNC=2552 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=25bp_to_uc001ixw.2_5end | |||
|cluster_id=chr10:35379499..35379520,- | |||
|description=CAGE_peak_2_at_CUL2_5end | |||
|id=chr10:35379499..35379520,- | |||
|ontology_enrichment_celltype=CL:0000037!9.22e-26!172;CL:0000566!9.22e-26!172;CL:0000738!3.67e-25!140;CL:0000988!3.34e-24!182;CL:0002087!2.28e-23!119;CL:0002032!3.42e-23!165;CL:0000837!3.42e-23!165;CL:0002031!4.82e-19!124;CL:0000766!2.21e-14!76;CL:0000134!8.69e-14!358;CL:0000763!4.02e-13!112;CL:0000049!4.02e-13!112;CL:0002320!1.42e-12!365;CL:0000048!2.64e-12!430;CL:0002194!4.18e-12!63;CL:0000576!4.18e-12!63;CL:0000040!4.18e-12!63;CL:0000559!4.18e-12!63;CL:0000034!1.56e-11!444;CL:0002009!1.60e-11!65;CL:0000723!2.20e-11!436;CL:0000557!7.85e-11!71;CL:0002057!3.34e-10!42;CL:0000219!3.34e-10!390;CL:0000839!4.01e-10!70;CL:0000542!4.17e-10!53;CL:0000051!4.17e-10!53;CL:0000838!5.11e-10!52;CL:0000860!8.32e-10!45;CL:0000003!1.24e-07!722;CL:0000081!5.14e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.66e-08;33!CL:0002057;3.66e-08;33!CL:0000473;1.06e-07;39!CL:0000234;1.06e-07;39!CL:0000081;3.90e-07;11!CL:0002087;4.57e-07;104!CL:0000576;5.68e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.38e-26,168;CL:0000738,2.79e-25,136;CL:0000988,1.36e-24,177;CL:0002087,1.51e-23,115;CL:0002032,3.16e-23,161;CL:0000837,3.16e-23,161;CL:0002031,3.98e-19,120;CL:0000766,1.39e-14,72;CL:0000134,5.70e-14,354;CL:0000763,3.72e-13,108;CL:0000049,3.72e-13,108;CL:0002320,9.88e-13,361;CL:0000048,2.53e-12,427;CL:0002194,2.55e-12,59;CL:0000576,2.55e-12,59;CL:0000040,2.55e-12,59;CL:0000559,2.55e-12,59;CL:0002009,1.07e-11,61;CL:0000034,1.51e-11,441;CL:0000723,2.12e-11,433;CL:0000557,6.03e-11,67;CL:0000473,1.30e-10,48;CL:0000234,1.30e-10,48;CL:0000219,2.49e-10,386;CL:0000839,3.21e-10,66;CL:0000860,3.34e-10,42;CL:0002057,3.34e-10,42;CL:0000542,4.17e-10,53;CL:0000051,4.17e-10,53;CL:0000838,5.10e-10,52;CL:0000081,5.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.22e-11!375;UBERON:0002193!6.14e-11!112;UBERON:0002390!1.47e-10!102;UBERON:0003061!1.47e-10!102;UBERON:0001474!2.87e-09!86;UBERON:0004765!9.76e-09!101;UBERON:0001434!9.76e-09!101;UBERON:0002371!1.67e-08!80;UBERON:0002405!3.02e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.71e-12,371;UBERON:0002193,6.33e-11,108;UBERON:0002390,1.47e-10,98;UBERON:0003061,1.47e-10,98;UBERON:0001474,2.77e-09,82;UBERON:0002405,4.22e-09,93;UBERON:0004765,1.06e-08,90;UBERON:0002371,1.61e-08,76;UBERON:0001434,1.83e-08,100 | |||
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| ||
|short_description=p2@CUL2 | |||
}} | }} |
Latest revision as of 01:39, 18 September 2015
Short description: | p2@CUL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CUL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_uc001ixw.2_5end |
EntrezGene: | CUL2 |
HGNC: | 2552 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.71e-12 | 371 |
hemolymphoid system | 6.33e-11 | 108 |
hematopoietic system | 1.47e-10 | 98 |
blood island | 1.47e-10 | 98 |
bone element | 2.77e-09 | 82 |
immune system | 4.22e-09 | 93 |
skeletal element | 1.06e-08 | 90 |
bone marrow | 1.61e-08 | 76 |
skeletal system | 1.83e-08 | 100 |