FFCP PHASE1:Hg19::chr10:44801889..44801898,-: Difference between revisions
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|id=chr10:44801889..44801898,-
|short_description=p@chr10:44801889..44801898,-
|description=CAGE_peak_at_chr10:44801889..44801898,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:44801889..44801898,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr10:44801889..44801898,- | |||
|id=chr10:44801889..44801898,- | |||
|ontology_enrichment_celltype=CL:0000499!3.53e-15!27;CL:0000054!4.19e-12!2;CL:0000137!4.19e-12!2;CL:0000092!4.19e-12!2;CL:0000214!1.09e-08!3;CL:0000135!1.36e-08!3;CL:0000386!1.36e-08!3;CL:0000388!1.36e-08!3;CL:0002622!6.28e-08!3;CL:0000128!1.61e-07!7;CL:0000126!1.61e-07!7;CL:0000127!1.61e-07!7;CL:0002453!1.61e-07!7;CL:0000319!2.95e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.23e-66;1!CL:0000159;3.61e-34;2!CL:0000214;3.66e-23;3!CL:0000153;1.16e-08;9!CL:0000447;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.23e-66,1;CL:0000159,3.61e-34,2;CL:0000214,4.09e-23,3;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:200!4.19e-12!2;DOID:4305!4.19e-12!2;DOID:3030!2.95e-07!1;DOID:5662!3.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.23e-66;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.23e-66,1 | |||
|ontology_enrichment_uberon=UBERON:0004905!1.10e-10!5;UBERON:0000982!1.10e-10!5;UBERON:0004770!1.10e-10!5;UBERON:0006915!1.09e-08!3;UBERON:0002018!1.09e-08!3;UBERON:0002217!1.09e-08!3;UBERON:0007616!1.09e-08!3;UBERON:0000043!1.36e-08!3;UBERON:0005705!5.26e-07!1;UBERON:0008193!5.26e-07!1;UBERON:0002514!5.26e-07!1;UBERON:0003462!5.26e-07!1;UBERON:0008001!5.26e-07!1;UBERON:0007914!5.26e-07!1;UBERON:0003457!5.26e-07!1;UBERON:0009292!5.26e-07!1;UBERON:0007375!5.26e-07!1;UBERON:0003323!5.26e-07!1;UBERON:0002397!5.26e-07!1;UBERON:0001709!5.26e-07!1;UBERON:0004066!5.26e-07!1;UBERON:0002244!5.26e-07!1;UBERON:0005620!5.26e-07!1;UBERON:0004068!5.26e-07!1;UBERON:0004362!5.26e-07!1;UBERON:0001282!5.57e-07!1;UBERON:0009842!5.57e-07!1;UBERON:0003704!5.57e-07!1;UBERON:0001171!5.57e-07!1;UBERON:0001172!5.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.66e-23;3!UBERON:0007616;3.66e-23;3!UBERON:0002217;3.66e-23;3!UBERON:0002018;3.66e-23;3!UBERON:0004905;1.41e-09;8!UBERON:0000982;1.41e-09;8!UBERON:0004770;1.41e-09;8!UBERON:0004457;1.16e-08;9!UBERON:0000042;1.16e-08;9!UBERON:0000486;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.09e-23,3;UBERON:0007616,4.09e-23,3;UBERON:0002217,4.09e-23,3;UBERON:0002018,4.09e-23,3;UBERON:0004905,1.47e-09,8;UBERON:0000982,1.47e-09,8;UBERON:0004770,1.47e-09,8;UBERON:0004457,8.38e-07,12;UBERON:0000042,8.38e-07,12 | |||
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|short_description=p@chr10:44801889..44801898,- | |||
}} | }} |
Latest revision as of 13:46, 23 July 2015
Short description: | p@chr10:44801889..44801898, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:44801889..44801898, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.23e-66 | 1 |
seromucus secreting cell | 3.61e-34 | 2 |
synovial cell | 4.09e-23 | 3 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.09e-23 | 3 |
layer of synovial tissue | 4.09e-23 | 3 |
synovial joint | 4.09e-23 | 3 |
synovial membrane of synovial joint | 4.09e-23 | 3 |
articulation | 1.47e-09 | 8 |
skeletal joint | 1.47e-09 | 8 |
articular system | 1.47e-09 | 8 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.23e-66 | 1 |