FFCP PHASE1:Hg19::chr12:117256250..117256271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:117256250..117256271,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_at_chr12:117256250..117256271,+ | |description=CAGE_peak_at_chr12:117256250..117256271,+ | ||
|id=chr12:117256250..117256271,+ | |id=chr12:117256250..117256271,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.25e-35;10!CL:0002567;7.35e-31;3!CL:0000147;2.24e-25;14!CL:0000710;1.14e-17;20!CL:0000075;5.44e-13;27!CL:0000785;8.61e-12;1!CL:0000819;8.61e-12;1!CL:0002566;3.28e-11;1!CL:0002077;5.19e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.11e-35,10;CL:0000541,1.11e-35,10;CL:0002567,6.66e-31,3;CL:0000147,2.06e-25,14;CL:0000710,1.08e-17,20;CL:0000075,5.22e-13,27;CL:0000819,8.62e-12,1;CL:0002566,1.97e-11,1;CL:0002077,3.02e-10,34;CL:0000333,5.20e-08,41;CL:0000133,2.43e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.56e-12;1!UBERON:0006298;1.30e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.61e-12;1!DOID:8675;8.61e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,8.62e-12,1;DOID:8675,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.21e-14!115;UBERON:0002780!3.78e-08!41;UBERON:0001890!3.78e-08!41;UBERON:0006240!3.78e-08!41;UBERON:0003080!8.20e-08!42;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!6.21e-14!115;UBERON:0002780!3.78e-08!41;UBERON:0001890!3.78e-08!41;UBERON:0006240!3.78e-08!41;UBERON:0003080!8.20e-08!42;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.38e-21;2!UBERON:0002370;1.16e-20;2!UBERON:0005058;1.16e-20;2!UBERON:0009113;1.16e-20;2!UBERON:0001044;4.99e-16;6!UBERON:0003293;4.99e-16;6!UBERON:0003294;4.99e-16;6!UBERON:0010047;4.99e-16;6!UBERON:0003408;4.99e-16;6!UBERON:0000167;4.99e-16;6!UBERON:0001831;9.56e-12;1!UBERON:0001567;9.56e-12;1!UBERON:0001736;1.30e-11;1!UBERON:0004177;7.85e-09;5!UBERON:0005057;7.85e-09;5!UBERON:0001041;3.67e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.85e-25,10;UBERON:0001829,1.70e-21,2;UBERON:0001044,5.00e-16,6;UBERON:0003293,5.00e-16,6;UBERON:0003294,5.00e-16,6;UBERON:0010047,5.00e-16,6;UBERON:0000167,5.00e-16,6;UBERON:0001831,9.57e-12,1;UBERON:0001567,9.57e-12,1;UBERON:0008801,9.57e-12,1;UBERON:0001736,1.60e-11,1;UBERON:0006298,1.60e-11,1;UBERON:0002370,8.12e-11,4;UBERON:0005058,8.12e-11,4;UBERON:0009113,8.12e-11,4;UBERON:0003295,8.12e-11,4;UBERON:0005562,8.12e-11,4;UBERON:0003351,1.68e-07,6 | |||
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| ||
|short_description=p@chr12:117256250..117256271,+ | |short_description=p@chr12:117256250..117256271,+ | ||
}} | }} |
Latest revision as of 05:26, 24 July 2015
Short description: | p@chr12:117256250..117256271, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:117256250..117256271, + |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.11e-35 | 10 |
melanoblast | 1.11e-35 | 10 |
light melanocyte | 6.66e-31 | 3 |
pigment cell | 2.06e-25 | 14 |
neurecto-epithelial cell | 1.08e-17 | 20 |
columnar/cuboidal epithelial cell | 5.22e-13 | 27 |
B-1 B cell | 8.62e-12 | 1 |
dark melanocyte | 1.97e-11 | 1 |
ecto-epithelial cell | 3.02e-10 | 34 |
migratory neural crest cell | 5.20e-08 | 41 |
neurectodermal cell | 2.43e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 3.85e-25 | 10 |
major salivary gland | 1.70e-21 | 2 |
saliva-secreting gland | 5.00e-16 | 6 |
gland of oral region | 5.00e-16 | 6 |
gland of foregut | 5.00e-16 | 6 |
oral gland | 5.00e-16 | 6 |
oral cavity | 5.00e-16 | 6 |
parotid gland | 9.57e-12 | 1 |
cheek | 9.57e-12 | 1 |
parotid gland primordium | 9.57e-12 | 1 |
submandibular gland | 1.60e-11 | 1 |
submandibular gland primordium | 1.60e-11 | 1 |
thymus | 8.12e-11 | 4 |
hemolymphoid system gland | 8.12e-11 | 4 |
thymic region | 8.12e-11 | 4 |
pharyngeal gland | 8.12e-11 | 4 |
thymus primordium | 8.12e-11 | 4 |
pharyngeal epithelium | 1.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 8.62e-12 | 1 |
lymphosarcoma | 8.62e-12 | 1 |