FFCP PHASE1:Hg19::chr17:41394254..41394265,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41394254..41394265,+ | |||
|description=CAGE_peak_at_chr17:41394254..41394265,+ | |description=CAGE_peak_at_chr17:41394254..41394265,+ | ||
|id=chr17:41394254..41394265,+ | |id=chr17:41394254..41394265,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.50e-27!235;DOID:14566!2.72e-26!239;DOID:0050686!7.95e-19!137;DOID:305!4.72e-18!106;DOID:0050687!3.18e-17!143;DOID:1749!1.42e-13!14;DOID:2531!1.92e-11!51;DOID:0060083!1.92e-11!51;DOID:3119!2.46e-08!14;DOID:0060058!6.24e-08!10;DOID:1240!5.60e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.17e-15;8!DOID:4556;9.43e-11;3!DOID:1749;4.56e-09;14!DOID:8692;8.81e-09;31!DOID:1240;3.03e-08;39!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.53e-15,8;DOID:1240,4.44e-12,39;DOID:4556,8.17e-11,3;DOID:2531,2.38e-09,51;DOID:0060083,2.38e-09,51;DOID:1749,4.21e-09,14;DOID:8692,6.34e-09,31;DOID:0050686,1.34e-07,137;DOID:3908,5.38e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,2.70192184266644,0,0,0.706765357169704,0.432777279484182,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0.343189995723929,0.14405479798815,0,0,0.135904206073614,0,0.713987523454252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0.365377795142688,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.471797825567689,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0.590969204419841,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.294450700845729,0.243835849964539,0,0,0,0,0,1.79055697645231,0.118920090777569,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0.521482918420201,0.434377689410233,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0.142283686696828,0.318852545457645,0,0,0.211673582723883,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,2.70192184266644,0,0,0.706765357169704,0.432777279484182,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0.343189995723929,0.14405479798815,0,0,0.135904206073614,0,0.713987523454252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0.197611631897944,0.365377795142688,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.471797825567689,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0.590969204419841,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0.294450700845729,0.243835849964539,0,0,0,0,0,1.79055697645231,0.118920090777569,0.67767649223376,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.535661815816973,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr17:41394254..41394265,+ | |short_description=p@chr17:41394254..41394265,+ | ||
}} | }} |
Latest revision as of 17:13, 25 July 2015
Short description: | p@chr17:41394254..41394265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41394254..41394265, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.53e-15 | 8 |
leukemia | 4.44e-12 | 39 |
lung large cell carcinoma | 8.17e-11 | 3 |
hematologic cancer | 2.38e-09 | 51 |
immune system cancer | 2.38e-09 | 51 |
squamous cell carcinoma | 4.21e-09 | 14 |
myeloid leukemia | 6.34e-09 | 31 |
organ system cancer | 1.34e-07 | 137 |
non-small cell lung carcinoma | 5.38e-07 | 5 |