FFCP PHASE1:Hg19::chr10:81923378..81923389,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:81923378..81923389,-
|short_description=p@chr10:81923378..81923389,-
|description=CAGE_peak_at_chr10:81923378..81923389,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:81923378..81923389,- | |||
|description=CAGE_peak_at_chr10:81923378..81923389,- | |||
|id=chr10:81923378..81923389,- | |||
|ontology_enrichment_celltype=CL:0002552!2.91e-14!5;CL:0000594!2.49e-13!3;CL:0002551!1.94e-11!6;CL:0000188!1.95e-11!9;CL:0002602!2.19e-10!2;CL:0002600!4.08e-10!2;CL:0000055!1.77e-08!180;CL:0000057!8.43e-08!75;CL:0000183!8.86e-08!59;CL:0000187!2.86e-07!54;CL:0002521!5.98e-07!3;CL:0002564!6.33e-07!3;CL:0000680!8.85e-07!57;CL:0000056!8.85e-07!57;CL:0000355!8.85e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002602;2.32e-57;2!CL:0002600;1.91e-15;2!CL:0002521;9.43e-11;3!CL:0002564;9.43e-11;3!CL:0002552;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,1.13e-57,2;CL:0002600,2.05e-15,2;CL:0002521,8.99e-11,3;CL:0002564,1.20e-10,3;CL:0002552,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.60e-12!83;UBERON:0002329!2.60e-12!83;UBERON:0003077!2.60e-12!83;UBERON:0003059!2.60e-12!83;UBERON:0007282!2.60e-12!83;UBERON:0009618!2.60e-12!83;UBERON:0007285!2.60e-12!83;UBERON:0009568!2.19e-10!2;UBERON:0002216!2.19e-10!2;UBERON:0002209!2.19e-10!2;UBERON:0002213!2.19e-10!2;UBERON:0004267!2.19e-10!2;UBERON:0006444!2.19e-10!2;UBERON:0001995!2.19e-10!2;UBERON:0004715!2.19e-10!2;UBERON:0001468!2.19e-10!2;UBERON:0001130!2.19e-10!2;UBERON:0001066!2.19e-10!2;UBERON:0004290!3.94e-10!70;UBERON:0001828!6.18e-09!8;UBERON:0002072!2.04e-08!5;UBERON:0000486!3.53e-08!82;UBERON:0002067!1.20e-07!9;UBERON:0004016!1.20e-07!9;UBERON:0010083!1.20e-07!9;UBERON:0002418!3.53e-07!3;UBERON:0004755!3.53e-07!3;UBERON:0005256!3.79e-07!143;UBERON:0002190!5.98e-07!3;UBERON:0002242!6.33e-07!3;UBERON:0003068!6.33e-07!3;UBERON:0002328!6.33e-07!3;UBERON:0004880!6.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;2.32e-57;2!UBERON:0001995;2.32e-57;2!UBERON:0004715;2.32e-57;2!UBERON:0011135;2.30e-51;5!UBERON:0002216;2.30e-51;5!UBERON:0011134;2.30e-51;5!UBERON:0002209;2.30e-51;5!UBERON:0002213;2.30e-51;5!UBERON:0007844;2.30e-51;5!UBERON:0011138;2.30e-51;5!UBERON:0001130;2.30e-51;5!UBERON:0001066;2.30e-51;5!UBERON:0001468;2.30e-51;5!UBERON:0002418;1.12e-38;3!UBERON:0004755;1.12e-38;3!UBERON:0004905;1.76e-32;8!UBERON:0000982;1.76e-32;8!UBERON:0004770;1.76e-32;8!UBERON:0004765;6.30e-18;26!UBERON:0000075;1.12e-16;16!UBERON:0002190;9.43e-11;3!UBERON:0002242;9.43e-11;3!UBERON:0001434;1.35e-09;36!UBERON:0002072;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,1.13e-57,2;UBERON:0001995,1.13e-57,2;UBERON:0004715,1.13e-57,2;UBERON:0011135,2.30e-51,5;UBERON:0002216,2.30e-51,5;UBERON:0011134,2.30e-51,5;UBERON:0002209,2.30e-51,5;UBERON:0002213,2.30e-51,5;UBERON:0005856,2.30e-51,5;UBERON:0005866,2.30e-51,5;UBERON:0005863,2.30e-51,5;UBERON:0007844,2.30e-51,5;UBERON:0011138,2.30e-51,5;UBERON:0001130,2.30e-51,5;UBERON:0001066,2.30e-51,5;UBERON:0001468,2.30e-51,5;UBERON:0002418,6.91e-39,3;UBERON:0004755,6.91e-39,3;UBERON:0004905,1.77e-32,8;UBERON:0000982,1.77e-32,8;UBERON:0004770,1.77e-32,8;UBERON:0000075,1.12e-16,16;UBERON:0002190,8.99e-11,3;UBERON:0002242,1.20e-10,3;UBERON:0003068,1.20e-10,3;UBERON:0002328,1.20e-10,3;UBERON:0004880,1.20e-10,3;UBERON:0002072,5.70e-07,5 | |||
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| ||
|short_description=p@chr10:81923378..81923389,- | |||
}} | }} |
Latest revision as of 16:06, 23 July 2015
Short description: | p@chr10:81923378..81923389, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:81923378..81923389, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 1.13e-57 | 2 |
smooth muscle cell of trachea | 2.05e-15 | 2 |
subcutaneous fat cell | 8.99e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 1.20e-10 | 3 |
fibroblast of gingiva | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 1.13e-57 | 2 |
fibrocartilage | 1.13e-57 | 2 |
annulus fibrosus disci intervertebralis | 1.13e-57 | 2 |
intervertebral cartilage | 2.30e-51 | 5 |
symphysis | 2.30e-51 | 5 |
nonsynovial joint | 2.30e-51 | 5 |
fibrous joint | 2.30e-51 | 5 |
cartilaginous joint | 2.30e-51 | 5 |
developing mesenchymal condensation | 2.30e-51 | 5 |
pre-cartilage condensation | 2.30e-51 | 5 |
cartilaginous condensation | 2.30e-51 | 5 |
cartilage element | 2.30e-51 | 5 |
post-cranial axial skeletal system | 2.30e-51 | 5 |
vertebral column | 2.30e-51 | 5 |
intervertebral disk | 2.30e-51 | 5 |
intervertebral joint | 2.30e-51 | 5 |
cartilage tissue | 6.91e-39 | 3 |
skeletal tissue | 6.91e-39 | 3 |
articulation | 1.77e-32 | 8 |
skeletal joint | 1.77e-32 | 8 |
articular system | 1.77e-32 | 8 |
subdivision of skeletal system | 1.12e-16 | 16 |
subcutaneous adipose tissue | 8.99e-11 | 3 |
nucleus pulposus | 1.20e-10 | 3 |
axial mesoderm | 1.20e-10 | 3 |
notochord | 1.20e-10 | 3 |
chordamesoderm | 1.20e-10 | 3 |
hypodermis | 5.70e-07 | 5 |