FFCP PHASE1:Hg19::chr12:31742847..31742862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=42517 | |HGNC=42517 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536397_5end | |association_with_transcript=0bp_to_ENST00000536397_5end | ||
|cluster_id=chr12:31742847..31742862,+ | |||
|description=CAGE_peak_1_at_DENND5B-AS1_5end | |description=CAGE_peak_1_at_DENND5B-AS1_5end | ||
|id=chr12:31742847..31742862,+ | |id=chr12:31742847..31742862,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.44e-10!14;CL:0000945!7.34e-10!24;CL:0000826!7.34e-10!24 | |ontology_enrichment_celltype=CL:0000236!5.44e-10!14;CL:0000945!7.34e-10!24;CL:0000826!7.34e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.69e-77;13!CL:0000945;2.80e-41;24!CL:0000542;1.23e-15;53!CL:0002591;1.51e-13;1!CL:0000313;1.51e-13;1!CL:0000159;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.66e-71,14;CL:0000945,2.80e-41,24;CL:0000826,2.80e-41,24;CL:0000838,1.43e-18,52;CL:0000542,3.34e-18,53;CL:0000051,3.34e-18,53;CL:0002591,1.42e-13,1;CL:0000313,1.61e-13,1;CL:0000738,6.10e-08,136;CL:0002087,9.39e-08,115;CL:0000159,2.12e-07,2;CL:0002031,2.18e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;1.23e-15;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.51e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.19e-09!9;UBERON:0001557!1.88e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.51e-13;1!UBERON:0000078;2.05e-07;2!UBERON:0004909;2.05e-07;2!UBERON:0002012;2.05e-07;2!UBERON:0008886;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.61e-13,1;UBERON:0000078,1.99e-07,2;UBERON:0007497,1.99e-07,2;UBERON:0003643,1.99e-07,2;UBERON:0003504,1.99e-07,2;UBERON:0003469,1.99e-07,2;UBERON:0003496,1.99e-07,2;UBERON:0002012,1.99e-07,2;UBERON:0008886,1.99e-07,2;UBERON:0007303,1.99e-07,2;UBERON:0002061,1.99e-07,2;UBERON:0005432,1.99e-07,2;UBERON:0004363,1.99e-07,2;UBERON:0004909,2.12e-07,2 | |||
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| ||
|short_description=p1@DENND5B-AS1 | |short_description=p1@DENND5B-AS1 | ||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p1@DENND5B-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DENND5B-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536397_5end |
EntrezGene: | NA |
HGNC: | 42517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.66e-71 | 14 |
lymphocyte of B lineage | 2.80e-41 | 24 |
pro-B cell | 2.80e-41 | 24 |
lymphoid lineage restricted progenitor cell | 1.43e-18 | 52 |
lymphocyte | 3.34e-18 | 53 |
common lymphoid progenitor | 3.34e-18 | 53 |
smooth muscle cell of the pulmonary artery | 1.42e-13 | 1 |
serous secreting cell | 1.61e-13 | 1 |
leukocyte | 6.10e-08 | 136 |
nongranular leukocyte | 9.39e-08 | 115 |
seromucus secreting cell | 2.12e-07 | 2 |
hematopoietic lineage restricted progenitor cell | 2.18e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.61e-13 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.99e-07 | 2 |
developing epithelial placode | 1.99e-07 | 2 |
respiratory system arterial blood vessel | 1.99e-07 | 2 |
respiratory system blood vessel | 1.99e-07 | 2 |
respiratory system artery | 1.99e-07 | 2 |
head blood vessel | 1.99e-07 | 2 |
pulmonary artery | 1.99e-07 | 2 |
pulmonary vascular system | 1.99e-07 | 2 |
pharyngeal vasculature | 1.99e-07 | 2 |
truncus arteriosus | 1.99e-07 | 2 |
aortic sac | 1.99e-07 | 2 |
pharyngeal arch artery | 1.99e-07 | 2 |
epithelium of gonad | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.61e-13 | 1 |