FFCP PHASE1:Hg19::chr10:91087733..91087762,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:91087733..91087762,+
|short_description=p1@IFIT3
|description=CAGE_peak_1_at_IFIT3_5end
|association_with_transcript=82bp_to_ENST00000371818_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3437 | |EntrezGene=3437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5411 | |HGNC=5411 | ||
|TSSclassifier=strong | |||
|UniProt=O14879 | |UniProt=O14879 | ||
|association_with_transcript=82bp_to_ENST00000371818_5end | |||
|cluster_id=chr10:91087733..91087762,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_IFIT3_5end | |||
|id=chr10:91087733..91087762,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.46e-23!76;CL:0002057!3.00e-21!42;CL:0000860!4.00e-21!45;CL:0000839!3.56e-20!70;CL:0000557!4.69e-19!71;CL:0002194!9.71e-19!63;CL:0000576!9.71e-19!63;CL:0000040!9.71e-19!63;CL:0000559!9.71e-19!63;CL:0002009!1.15e-18!65;CL:0000763!3.82e-12!112;CL:0000049!3.82e-12!112;CL:0000738!3.58e-11!140;CL:0002031!1.59e-10!124;CL:0002087!5.55e-09!119;CL:0002032!3.78e-07!165;CL:0000837!3.78e-07!165;CL:0000037!7.94e-07!172;CL:0000566!7.94e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-16;33!CL:0002057;2.99e-16;33!CL:0000473;5.82e-16;39!CL:0000234;5.82e-16;39!CL:0000576;4.01e-12;48!CL:0000766;1.34e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.80e-24,48;CL:0000234,2.80e-24,48;CL:0000766,2.88e-24,72;CL:0000860,1.47e-21,42;CL:0002057,1.47e-21,42;CL:0000839,3.69e-21,66;CL:0000557,4.52e-20,67;CL:0002194,9.75e-20,59;CL:0000576,9.75e-20,59;CL:0000040,9.75e-20,59;CL:0000559,9.75e-20,59;CL:0002009,1.26e-19,61;CL:0000763,1.04e-12,108;CL:0000049,1.04e-12,108;CL:0000738,1.89e-11,136;CL:0002031,8.02e-11,120;CL:0002087,3.43e-09,115;CL:0002032,2.06e-07,161;CL:0000837,2.06e-07,161;CL:0000037,4.10e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-19!102;UBERON:0003061!1.33e-19!102;UBERON:0002193!3.85e-18!112;UBERON:0002371!2.41e-17!80;UBERON:0001474!1.48e-15!86;UBERON:0004765!2.07e-15!101;UBERON:0001434!2.07e-15!101;UBERON:0002405!1.95e-10!115;UBERON:0007023!1.50e-09!115;UBERON:0000062!5.67e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-20,98;UBERON:0003061,1.08e-20,98;UBERON:0002193,6.04e-19,108;UBERON:0002371,2.63e-18,76;UBERON:0001474,2.01e-16,82;UBERON:0002405,2.65e-16,93;UBERON:0004765,9.08e-16,90;UBERON:0001434,2.75e-15,100;UBERON:0007023,6.18e-09,114 | |||
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| ||
|short_description=p1@IFIT3 | |||
}} | }} |
Latest revision as of 22:15, 19 September 2015
Short description: | p1@IFIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFIT3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 82bp_to_ENST00000371818_5end |
EntrezGene: | IFIT3 |
HGNC: | 5411 |
UniProt: | O14879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.80e-24 | 48 |
phagocyte | 2.80e-24 | 48 |
myeloid leukocyte | 2.88e-24 | 72 |
classical monocyte | 1.47e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-21 | 42 |
myeloid lineage restricted progenitor cell | 3.69e-21 | 66 |
granulocyte monocyte progenitor cell | 4.52e-20 | 67 |
monopoietic cell | 9.75e-20 | 59 |
monocyte | 9.75e-20 | 59 |
monoblast | 9.75e-20 | 59 |
promonocyte | 9.75e-20 | 59 |
macrophage dendritic cell progenitor | 1.26e-19 | 61 |
myeloid cell | 1.04e-12 | 108 |
common myeloid progenitor | 1.04e-12 | 108 |
leukocyte | 1.89e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 8.02e-11 | 120 |
nongranular leukocyte | 3.43e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.06e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-07 | 161 |
hematopoietic stem cell | 4.10e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-20 | 98 |
blood island | 1.08e-20 | 98 |
hemolymphoid system | 6.04e-19 | 108 |
bone marrow | 2.63e-18 | 76 |
bone element | 2.01e-16 | 82 |
immune system | 2.65e-16 | 93 |
skeletal element | 9.08e-16 | 90 |
skeletal system | 2.75e-15 | 100 |
adult organism | 6.18e-09 | 114 |