FFCP PHASE1:Hg19::chr12:54431633..54431644,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3221 | |EntrezGene=3221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5126 | |HGNC=5126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000507650_5end | |association_with_transcript=0bp_to_ENST00000507650_5end | ||
|cluster_id=chr12:54431633..54431644,+ | |||
|description=CAGE_peak_15_at_HOXC4_5end | |description=CAGE_peak_15_at_HOXC4_5end | ||
|id=chr12:54431633..54431644,+ | |id=chr12:54431633..54431644,+ | ||
|ontology_enrichment_celltype=CL:0002551!1.35e-09!6;CL:0002566!2.47e-07!1 | |ontology_enrichment_celltype=CL:0002551!1.35e-09!6;CL:0002566!2.47e-07!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.21e-13;2!UBERON:0003918;6.28e-11;10!UBERON:0007687;6.28e-11;10!UBERON:0003104;4.12e-08;31 | |||
|ontology_enrichment_disease=DOID:2355!4.57e-08!1;DOID:5409!1.39e-07!4 | |ontology_enrichment_disease=DOID:2355!4.57e-08!1;DOID:5409!1.39e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.78e-26;1!DOID:5409;9.81e-26;4!DOID:1325;3.53e-15;7!DOID:3904;3.53e-15;7!DOID:74;7.30e-14;2!DOID:3905;4.94e-12;9!DOID:1324;1.35e-07;15!DOID:1287;1.40e-07;4!DOID:0050615;3.55e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.78e-26,1;DOID:5409,9.82e-26,4;DOID:1325,3.53e-15,7;DOID:3904,3.53e-15,7;DOID:74,7.30e-14,2;DOID:3905,4.94e-12,9;DOID:1324,1.35e-07,15;DOID:1287,1.40e-07,4;DOID:0050615,3.55e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001301!6.80e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;7.62e-26;1!UBERON:0006947;1.53e-09;3!UBERON:0004054;1.53e-09;3!UBERON:0005904;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.26e-25,1;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0002113,2.82e-09,26;UBERON:0003918,2.82e-09,26;UBERON:0011143,2.82e-09,26;UBERON:0005095,2.82e-09,26;UBERON:0007687,2.82e-09,26;UBERON:0000489,7.02e-08,31;UBERON:0005904,2.04e-07,4 | |||
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|short_description=p15@HOXC4 | |short_description=p15@HOXC4 | ||
}} | }} |
Latest revision as of 05:05, 19 September 2015
Short description: | p15@HOXC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_HOXC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000507650_5end |
EntrezGene: | HOXC4 |
HGNC: | 5126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.26e-25 | 1 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
kidney | 2.82e-09 | 26 |
kidney mesenchyme | 2.82e-09 | 26 |
upper urinary tract | 2.82e-09 | 26 |
kidney rudiment | 2.82e-09 | 26 |
kidney field | 2.82e-09 | 26 |
cavitated compound organ | 7.02e-08 | 31 |
duct of male reproductive system | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.78e-26 | 1 |
lung small cell carcinoma | 9.82e-26 | 4 |
bronchus cancer | 3.53e-15 | 7 |
bronchogenic carcinoma | 3.53e-15 | 7 |
hematopoietic system disease | 7.30e-14 | 2 |
lung carcinoma | 4.94e-12 | 9 |
lung cancer | 1.35e-07 | 15 |
cardiovascular system disease | 1.40e-07 | 4 |
respiratory system cancer | 3.55e-07 | 16 |