FFCP PHASE1:Hg19::chr17:74547180..74547195,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114757 | |EntrezGene=114757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16505 | |HGNC=16505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_uc002jrv.1_5end | |association_with_transcript=-12bp_to_uc002jrv.1_5end | ||
|cluster_id=chr17:74547180..74547195,- | |||
|description=CAGE_peak_12_at_CYGB_5end | |description=CAGE_peak_12_at_CYGB_5end | ||
|id=chr17:74547180..74547195,- | |id=chr17:74547180..74547195,- | ||
|ontology_enrichment_celltype=CL:0000223!1.82e-19!59;CL:0002076!4.86e-18!43;CL:0000066!1.08e-15!254;CL:0002368!4.47e-11!13;CL:0002159!2.28e-10!13;CL:0002251!1.92e-09!21;CL:0000244!5.74e-09!4;CL:0000731!5.74e-09!4;CL:0000220!3.63e-08!246;CL:0002321!5.44e-08!248;CL:0002202!1.61e-07!9;CL:0002632!1.61e-07!9;CL:0000068!9.48e-07!3;CL:0000069!9.48e-07!3;CL:0000307!9.48e-07!3;CL:0000377!9.48e-07!3 | |ontology_enrichment_celltype=CL:0000223!1.82e-19!59;CL:0002076!4.86e-18!43;CL:0000066!1.08e-15!254;CL:0002368!4.47e-11!13;CL:0002159!2.28e-10!13;CL:0002251!1.92e-09!21;CL:0000244!5.74e-09!4;CL:0000731!5.74e-09!4;CL:0000220!3.63e-08!246;CL:0002321!5.44e-08!248;CL:0002202!1.61e-07!9;CL:0002632!1.61e-07!9;CL:0000068!9.48e-07!3;CL:0000069!9.48e-07!3;CL:0000307!9.48e-07!3;CL:0000377!9.48e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.83e-35;13!CL:0000244;1.41e-25;4!CL:0000731;1.41e-25;4!CL:0002202;6.61e-23;9!CL:0002632;6.61e-23;9!CL:0002076;1.23e-19;42!CL:0000307;2.30e-18;3!CL:0002328;5.26e-18;3!CL:0000317;1.82e-13;2!CL:1000448;1.82e-13;2!CL:0002308;1.82e-13;2!CL:0002140;1.82e-13;2!CL:0000622;1.85e-11;5!CL:0000150;9.01e-11;9!CL:0002159;1.45e-10;14!CL:0000154;1.26e-09;6!CL:0002336;1.58e-07;1!CL:0002261;1.58e-07;1!CL:0002170;1.58e-07;1!CL:0002252;3.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.48e-35,13;CL:0000223,7.13e-26,58;CL:0000244,1.50e-25,4;CL:0000731,1.50e-25,4;CL:0002076,1.21e-24,42;CL:0002202,4.15e-23,9;CL:0002632,4.15e-23,9;CL:0000068,2.23e-18,3;CL:0000069,2.23e-18,3;CL:0000307,2.23e-18,3;CL:0000377,2.23e-18,3;CL:0002328,2.67e-18,3;CL:0000066,2.91e-14,253;CL:0000317,2.00e-13,2;CL:1000448,2.00e-13,2;CL:0002308,2.00e-13,2;CL:0002140,2.00e-13,2;CL:0000622,2.14e-11,5;CL:0000150,1.12e-10,9;CL:0002321,1.28e-10,250;CL:0002159,1.31e-10,14;CL:0000154,1.41e-09,6;CL:0002336,1.44e-07,1;CL:0002261,1.44e-07,1;CL:0002170,1.44e-07,1;CL:0002252,3.41e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;2.30e-18;3!CL:0000223;1.10e-14;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.34e-07;1!DOID:3149;5.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.40e-07,1;DOID:3149,7.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.16e-15!169;UBERON:0000925!2.16e-15!169;UBERON:0006595!2.16e-15!169;UBERON:0001004!2.29e-11!72;UBERON:0000466!3.95e-11!126;UBERON:0001007!9.99e-11!155;UBERON:0001555!9.99e-11!155;UBERON:0007026!9.99e-11!155;UBERON:0000464!4.69e-10!104;UBERON:0005911!6.97e-09!82;UBERON:0005177!1.94e-08!107;UBERON:0005178!3.09e-08!34;UBERON:0002224!3.09e-08!34;UBERON:0005181!6.86e-08!35;UBERON:0000166!1.13e-07!21;UBERON:0009569!1.31e-07!113;UBERON:0000165!1.37e-07!28;UBERON:0000930!1.37e-07!28;UBERON:0000475!2.19e-07!365;UBERON:0000365!4.17e-07!5;UBERON:0001041!5.85e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.68e-20;5!UBERON:0004815;5.26e-18;3!UBERON:0002031;5.26e-18;3!UBERON:0005910;4.12e-17;6!UBERON:0007196;1.51e-13;15!UBERON:0001558;1.51e-13;15!UBERON:0002419;1.82e-13;2!UBERON:0007771;1.82e-13;2!UBERON:0003297;1.82e-13;2!UBERON:0001821;1.82e-13;2!UBERON:0003487;1.82e-13;2!UBERON:0001820;1.82e-13;2!UBERON:0000486;9.75e-13;12!UBERON:0002185;5.05e-11;5!UBERON:0003126;3.69e-08;7!UBERON:0001005;3.69e-08;7!UBERON:0000485;5.21e-08;7!UBERON:0005911;8.16e-08;36!UBERON:0005178;1.17e-07;34!UBERON:0002224;1.17e-07;34!UBERON:0000065;1.43e-07;44!UBERON:0005181;5.46e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.77e-20,5;UBERON:0004815,2.67e-18,3;UBERON:0002031,2.67e-18,3;UBERON:0005910,4.29e-17,6;UBERON:0007196,1.15e-13,15;UBERON:0001558,1.15e-13,15;UBERON:0002419,2.00e-13,2;UBERON:0007771,2.00e-13,2;UBERON:0003297,2.00e-13,2;UBERON:0001821,2.00e-13,2;UBERON:0003487,2.00e-13,2;UBERON:0001820,2.00e-13,2;UBERON:0005089,2.00e-13,2;UBERON:0005088,2.00e-13,2;UBERON:0004119,2.44e-13,160;UBERON:0000925,2.44e-13,160;UBERON:0006595,2.44e-13,160;UBERON:0002185,3.38e-11,5;UBERON:0001004,4.40e-09,74;UBERON:0005911,2.98e-08,82;UBERON:0003126,3.65e-08,7;UBERON:0001005,3.65e-08,7;UBERON:0005178,1.21e-07,34;UBERON:0002224,1.21e-07,34;UBERON:0000065,1.89e-07,54;UBERON:0005181,2.11e-07,35 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,3.31326510656075,1.84877005083394,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,2.91436230634034,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.966304265816484,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,1.64625428112938,0,0.301586917234893,4.81459914824354,0,0,0,0,0.234817388471643,0,0,0.380508304469197,0,0,0.246217006087397,0,0,0.93733833986777,0.503946384596579,3.54437743105966,0.268675568108545,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,2.40607764363942,0.0920809889358963,0,0,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,4.01985876597321,5.20048196829217,0,0,0,0,0,0,0,0,0,4.29740779938543,0,5.48734663726712,1.8208400553999,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,1.53955380360819,2.68120910214315,4.3556393944529,0.188287601553558,6.45758059006845,5.05414427002877,6.20802214951346,7.3511488066227,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.83654246567162,0,0,0,2.15418346583453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,3.15132729228895,3.29663433524666,3.23537010500087,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,3.12451019905266,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0.231522474323834,0,0,1.23520578864389,0,0,0.38582807654183,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,1.19502933965765,0.691259661814092,0.430227358820278,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0,0,0,0.253397002022874,0.101988829741982,0.26721740526556,0.275684698604535,0,0.151557396436479,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p12@CYGB | |short_description=p12@CYGB | ||
}} | }} |
Latest revision as of 15:47, 17 September 2015
Short description: | p12@CYGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CYGB_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_uc002jrv.1_5end |
EntrezGene: | CYGB |
HGNC: | 16505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.48e-35 | 13 |
endodermal cell | 7.13e-26 | 58 |
transitional epithelial cell | 1.50e-25 | 4 |
urothelial cell | 1.50e-25 | 4 |
endo-epithelial cell | 1.21e-24 | 42 |
epithelial cell of tracheobronchial tree | 4.15e-23 | 9 |
epithelial cell of lower respiratory tract | 4.15e-23 | 9 |
duct epithelial cell | 2.23e-18 | 3 |
branched duct epithelial cell | 2.23e-18 | 3 |
tracheal epithelial cell | 2.23e-18 | 3 |
tracheoblast | 2.23e-18 | 3 |
bronchial epithelial cell | 2.67e-18 | 3 |
epithelial cell | 2.91e-14 | 253 |
sebum secreting cell | 2.00e-13 | 2 |
epithelial cell of sweat gland | 2.00e-13 | 2 |
epithelial cell of skin gland | 2.00e-13 | 2 |
acinar cell of sebaceous gland | 2.00e-13 | 2 |
acinar cell | 2.14e-11 | 5 |
glandular epithelial cell | 1.12e-10 | 9 |
embryonic cell | 1.28e-10 | 250 |
general ecto-epithelial cell | 1.31e-10 | 14 |
protein secreting cell | 1.41e-09 | 6 |
buccal mucosa cell | 1.44e-07 | 1 |
endothelial cell of viscerocranial mucosa | 1.44e-07 | 1 |
keratinized cell of the oral mucosa | 1.44e-07 | 1 |
epithelial cell of esophagus | 3.41e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.77e-20 | 5 |
lower respiratory tract epithelium | 2.67e-18 | 3 |
epithelium of bronchus | 2.67e-18 | 3 |
transitional epithelium | 4.29e-17 | 6 |
tracheobronchial tree | 1.15e-13 | 15 |
lower respiratory tract | 1.15e-13 | 15 |
skin gland | 2.00e-13 | 2 |
epidermis gland | 2.00e-13 | 2 |
gland of integumental system | 2.00e-13 | 2 |
sebaceous gland | 2.00e-13 | 2 |
skin sebaceous gland | 2.00e-13 | 2 |
sweat gland | 2.00e-13 | 2 |
sweat gland placode | 2.00e-13 | 2 |
sebaceous gland placode | 2.00e-13 | 2 |
endoderm-derived structure | 2.44e-13 | 160 |
endoderm | 2.44e-13 | 160 |
presumptive endoderm | 2.44e-13 | 160 |
bronchus | 3.38e-11 | 5 |
respiratory system | 4.40e-09 | 74 |
endo-epithelium | 2.98e-08 | 82 |
trachea | 3.65e-08 | 7 |
respiratory airway | 3.65e-08 | 7 |
thoracic cavity element | 1.21e-07 | 34 |
thoracic cavity | 1.21e-07 | 34 |
respiratory tract | 1.89e-07 | 54 |
thoracic segment organ | 2.11e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.40e-07 | 1 |
keratoacanthoma | 7.40e-07 | 1 |