FFCP PHASE1:Hg19::chr12:69140023..69140055,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55508 | |EntrezGene=55508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20864 | |HGNC=20864 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z769 | |UniProt=Q7Z769 | ||
|association_with_transcript=87bp_to_NM_018656,uc001suh.2_5end | |association_with_transcript=87bp_to_NM_018656,uc001suh.2_5end | ||
|cluster_id=chr12:69140023..69140055,+ | |||
|description=CAGE_peak_4_at_SLC35E3_5end | |description=CAGE_peak_4_at_SLC35E3_5end | ||
|id=chr12:69140023..69140055,+ | |id=chr12:69140023..69140055,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.43e-17!45;CL:0002057!2.32e-16!42;CL:0000766!5.06e-16!76;CL:0002194!5.35e-16!63;CL:0000576!5.35e-16!63;CL:0000040!5.35e-16!63;CL:0000559!5.35e-16!63;CL:0002009!8.84e-16!65;CL:0002087!7.50e-14!119;CL:0000557!1.48e-13!71;CL:0000839!2.11e-12!70;CL:0000738!6.29e-12!140;CL:0002031!4.36e-11!124;CL:0002032!5.62e-09!165;CL:0000837!5.62e-09!165;CL:0000763!1.40e-08!112;CL:0000049!1.40e-08!112;CL:0000037!1.84e-08!172;CL:0000566!1.84e-08!172;CL:0000988!3.30e-07!182 | |ontology_enrichment_celltype=CL:0000860!1.43e-17!45;CL:0002057!2.32e-16!42;CL:0000766!5.06e-16!76;CL:0002194!5.35e-16!63;CL:0000576!5.35e-16!63;CL:0000040!5.35e-16!63;CL:0000559!5.35e-16!63;CL:0002009!8.84e-16!65;CL:0002087!7.50e-14!119;CL:0000557!1.48e-13!71;CL:0000839!2.11e-12!70;CL:0000738!6.29e-12!140;CL:0002031!4.36e-11!124;CL:0002032!5.62e-09!165;CL:0000837!5.62e-09!165;CL:0000763!1.40e-08!112;CL:0000049!1.40e-08!112;CL:0000037!1.84e-08!172;CL:0000566!1.84e-08!172;CL:0000988!3.30e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.97e-14;33!CL:0002057;4.97e-14;33!CL:0000473;5.34e-12;39!CL:0000234;5.34e-12;39!CL:0000576;1.78e-10;48!CL:0000766;1.47e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.06e-19,48;CL:0000234,3.06e-19,48;CL:0000860,3.57e-19,42;CL:0002057,3.57e-19,42;CL:0002194,5.38e-18,59;CL:0000576,5.38e-18,59;CL:0000040,5.38e-18,59;CL:0000559,5.38e-18,59;CL:0000766,7.69e-18,72;CL:0002009,1.23e-17,61;CL:0000557,5.00e-15,67;CL:0000839,3.94e-14,66;CL:0002087,2.88e-13,115;CL:0000738,3.50e-12,136;CL:0002031,7.35e-11,120;CL:0000763,1.04e-09,108;CL:0000049,1.04e-09,108;CL:0002032,1.16e-08,161;CL:0000837,1.16e-08,161;CL:0000037,2.36e-08,168;CL:0000988,3.72e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;7.10e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.48e-13!115;UBERON:0001474!3.43e-12!86;UBERON:0002371!6.60e-12!80;UBERON:0002390!1.31e-11!102;UBERON:0003061!1.31e-11!102;UBERON:0002193!2.02e-11!112;UBERON:0004765!2.57e-09!101;UBERON:0001434!2.57e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.16e-13,82;UBERON:0002371,3.02e-13,76;UBERON:0002390,1.66e-12,98;UBERON:0003061,1.66e-12,98;UBERON:0002405,2.09e-12,93;UBERON:0002193,8.55e-12,108;UBERON:0004765,1.67e-11,90;UBERON:0001434,4.94e-09,100 | |||
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| ||
|short_description=p4@SLC35E3 | |short_description=p4@SLC35E3 | ||
}} | }} |
Latest revision as of 03:51, 20 September 2015
Short description: | p4@SLC35E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 87bp_to_NM_018656, uc001suh.2_5end |
EntrezGene: | SLC35E3 |
HGNC: | 20864 |
UniProt: | Q7Z769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.06e-19 | 48 |
phagocyte | 3.06e-19 | 48 |
classical monocyte | 3.57e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-19 | 42 |
monopoietic cell | 5.38e-18 | 59 |
monocyte | 5.38e-18 | 59 |
monoblast | 5.38e-18 | 59 |
promonocyte | 5.38e-18 | 59 |
myeloid leukocyte | 7.69e-18 | 72 |
macrophage dendritic cell progenitor | 1.23e-17 | 61 |
granulocyte monocyte progenitor cell | 5.00e-15 | 67 |
myeloid lineage restricted progenitor cell | 3.94e-14 | 66 |
nongranular leukocyte | 2.88e-13 | 115 |
leukocyte | 3.50e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 7.35e-11 | 120 |
myeloid cell | 1.04e-09 | 108 |
common myeloid progenitor | 1.04e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.16e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-08 | 161 |
hematopoietic stem cell | 2.36e-08 | 168 |
hematopoietic cell | 3.72e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.16e-13 | 82 |
bone marrow | 3.02e-13 | 76 |
hematopoietic system | 1.66e-12 | 98 |
blood island | 1.66e-12 | 98 |
immune system | 2.09e-12 | 93 |
hemolymphoid system | 8.55e-12 | 108 |
skeletal element | 1.67e-11 | 90 |
skeletal system | 4.94e-09 | 100 |