FFCP PHASE1:Hg19::chr12:79357890..79357893,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYH8 | |UniProt=F8VYH8 | ||
|association_with_transcript=75bp_to_ENST00000547046_5end | |association_with_transcript=75bp_to_ENST00000547046_5end | ||
|cluster_id=chr12:79357890..79357893,+ | |||
|description=CAGE_peak_6_at_SYT1_5end | |description=CAGE_peak_6_at_SYT1_5end | ||
|id=chr12:79357890..79357893,+ | |id=chr12:79357890..79357893,+ | ||
|ontology_enrichment_celltype=CL:0000680!2.21e-15!57;CL:0000056!2.21e-15!57;CL:0000355!2.21e-15!57;CL:0000187!1.07e-12!54;CL:0000183!6.14e-12!59;CL:0000393!1.24e-10!60;CL:0000211!1.24e-10!60;CL:0000220!5.78e-10!246;CL:0000188!5.95e-10!9;CL:0002321!9.61e-10!248;CL:0000055!1.57e-09!180;CL:0000359!3.10e-08!32;CL:0000222!4.88e-08!119;CL:0000192!7.52e-08!42;CL:0000514!7.52e-08!42;CL:0000515!5.74e-07!4 | |ontology_enrichment_celltype=CL:0000680!2.21e-15!57;CL:0000056!2.21e-15!57;CL:0000355!2.21e-15!57;CL:0000187!1.07e-12!54;CL:0000183!6.14e-12!59;CL:0000393!1.24e-10!60;CL:0000211!1.24e-10!60;CL:0000220!5.78e-10!246;CL:0000188!5.95e-10!9;CL:0002321!9.61e-10!248;CL:0000055!1.57e-09!180;CL:0000359!3.10e-08!32;CL:0000222!4.88e-08!119;CL:0000192!7.52e-08!42;CL:0000514!7.52e-08!42;CL:0000515!5.74e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000188;8.36e-10;9!CL:0000056;3.85e-09;4!CL:0000680;1.25e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.59e-10,9;CL:0000515,3.70e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.85e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.37e-07!14 | |ontology_enrichment_disease=DOID:2394!1.37e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!4.80e-15!61;UBERON:0002036!4.80e-15!61;UBERON:0003082!4.80e-15!61;UBERON:0002385!2.91e-14!63;UBERON:0001015!2.91e-14!63;UBERON:0000383!2.91e-14!63;UBERON:0000486!2.51e-13!82;UBERON:0000914!3.46e-13!83;UBERON:0002329!3.46e-13!83;UBERON:0003077!3.46e-13!83;UBERON:0003059!3.46e-13!83;UBERON:0007282!3.46e-13!83;UBERON:0009618!3.46e-13!83;UBERON:0007285!3.46e-13!83;UBERON:0004290!6.65e-12!70;UBERON:0002100!2.98e-07!216;UBERON:0005256!3.02e-07!143 | |ontology_enrichment_uberon=UBERON:0001134!4.80e-15!61;UBERON:0002036!4.80e-15!61;UBERON:0003082!4.80e-15!61;UBERON:0002385!2.91e-14!63;UBERON:0001015!2.91e-14!63;UBERON:0000383!2.91e-14!63;UBERON:0000486!2.51e-13!82;UBERON:0000914!3.46e-13!83;UBERON:0002329!3.46e-13!83;UBERON:0003077!3.46e-13!83;UBERON:0003059!3.46e-13!83;UBERON:0007282!3.46e-13!83;UBERON:0009618!3.46e-13!83;UBERON:0007285!3.46e-13!83;UBERON:0004290!6.65e-12!70;UBERON:0002100!2.98e-07!216;UBERON:0005256!3.02e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.08e-13;16!UBERON:0002036;2.08e-13;16!UBERON:0002385;4.08e-09;31!UBERON:0001015;4.08e-09;31!UBERON:0000383;4.08e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.04e-07,62;UBERON:0002036,5.04e-07,62;UBERON:0003082,5.04e-07,62 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,7.81214166797991,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0.717558542755448,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0,0,0,0,0,0,0.201504196455281,0,2.89891279744945,0.818238361772504,6.59650569394709,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,7.46301940778654,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,5.62403003920662,10.750856204727,0.425325291727159,4.11969204433102,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,1.0267360014933,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01439377059586,6.10073421020206,2.39935178836937,0,0,0,0.479249710983165,0,2.85273810081437,7.52862794671412,0.410952645100767,4.29746311775749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,5.41367469818869,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,5.22021878777459,0,0.921022048356777,1.7918754422989,0.107420244868274,0.435050081742686,1.61930592090592,3.73934549716297,1.32227932288782,1.72971060628596,3.82838137483752,0.10115778085555,0,1.88887408098384,0,1.23213432070436,0.532306030317022,0.869932992075073,0.55597265731176,0.715624433709956,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,3.3171948762061,4.82295973779139,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,8.89095921157095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,3.88448607254548,0,0,0,0,0,0,0,3.64091151463049,0.627865836814451,1.19472429772959,0,9.70722711091971,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,1.22313785466253,0.418411385249333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,1.15149118391667,0,0,0,0.542999601753713,1.72844298240254,2.93928624098468,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0,0.147855149989634,0.63718706865481,0,0.621051827505038,1.24411862352257,3.72178400381193,1.5652351854352,0,11.4241563650639,5.2893195316606,0,0.429642228169954,0,0.796191777397232,22.0015270564734,0,0,2.52369796457302,0,0,0.260994291965212,1.13352962756136,0,0,0,0,0,0,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,3.40509572140102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08827603141431,6.6466455712143,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,13.4003082370911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,1.9307228228694,0,0,0,0,0,0,0 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| ||
|short_description=p6@SYT1 | |short_description=p6@SYT1 | ||
}} | }} |
Latest revision as of 23:18, 24 September 2015
Short description: | p6@SYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_ENST00000547046_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VYH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.59e-10 | 9 |
skeletal muscle myoblast | 3.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.04e-07 | 62 |
striated muscle tissue | 5.04e-07 | 62 |
myotome | 5.04e-07 | 62 |