FFCP PHASE1:Hg19::chr18:21594523..21594539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=139bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | |association_with_transcript=139bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | ||
|cluster_id=chr18:21594523..21594539,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_3_at_TTC39C_5end | |description=CAGE_peak_3_at_TTC39C_5end | ||
|id=chr18:21594523..21594539,+ | |id=chr18:21594523..21594539,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.06e-22!53;CL:0000051!4.06e-22!53;CL:0000838!1.19e-21!52;CL:0002087!6.92e-17!119;CL:0000738!6.12e-15!140;CL:0000037!6.28e-14!172;CL:0000566!6.28e-14!172;CL:0000791!4.54e-13!18;CL:0000789!4.54e-13!18;CL:0002420!4.54e-13!18;CL:0002419!4.54e-13!18;CL:0000790!4.54e-13!18;CL:0000988!2.41e-12!182;CL:0002031!4.80e-12!124;CL:0002032!7.75e-12!165;CL:0000837!7.75e-12!165;CL:0000084!1.70e-11!25;CL:0000827!1.70e-11!25;CL:0000945!1.30e-09!24;CL:0000826!1.30e-09!24;CL:0000625!2.11e-08!11;CL:0000236!2.51e-08!14 | |ontology_enrichment_celltype=CL:0000542!4.06e-22!53;CL:0000051!4.06e-22!53;CL:0000838!1.19e-21!52;CL:0002087!6.92e-17!119;CL:0000738!6.12e-15!140;CL:0000037!6.28e-14!172;CL:0000566!6.28e-14!172;CL:0000791!4.54e-13!18;CL:0000789!4.54e-13!18;CL:0002420!4.54e-13!18;CL:0002419!4.54e-13!18;CL:0000790!4.54e-13!18;CL:0000988!2.41e-12!182;CL:0002031!4.80e-12!124;CL:0002032!7.75e-12!165;CL:0000837!7.75e-12!165;CL:0000084!1.70e-11!25;CL:0000827!1.70e-11!25;CL:0000945!1.30e-09!24;CL:0000826!1.30e-09!24;CL:0000625!2.11e-08!11;CL:0000236!2.51e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.40e-23;18!CL:0000789;3.40e-23;18!CL:0002419;3.40e-23;18!CL:0000542;1.43e-21;53!CL:0000084;1.28e-19;25!CL:0000945;1.83e-15;24!CL:0000625;2.15e-14;11!CL:0000236;2.16e-13;13!CL:0000624;2.23e-09;6!CL:0002087;1.01e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.38e-38,53;CL:0000051,2.38e-38,53;CL:0000838,1.80e-37,52;CL:0002087,5.16e-26,115;CL:0000738,2.59e-25,136;CL:0000037,4.43e-25,168;CL:0000988,5.00e-24,177;CL:0000791,3.39e-23,18;CL:0000789,3.39e-23,18;CL:0002420,3.39e-23,18;CL:0002419,3.39e-23,18;CL:0000790,3.39e-23,18;CL:0002032,3.12e-21,161;CL:0000837,3.12e-21,161;CL:0002031,1.03e-19,120;CL:0000084,1.64e-19,25;CL:0000827,1.64e-19,25;CL:0000945,1.41e-15,24;CL:0000826,1.41e-15,24;CL:0000625,2.04e-14,11;CL:0000236,2.82e-14,14;CL:0000624,2.30e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.40e-23;18!CL:0000051;1.43e-21;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.41e-09!15;UBERON:0000179!6.41e-09!15;UBERON:0000463!6.41e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.94e-14;15!UBERON:0000179;2.94e-14;15!UBERON:0000463;2.94e-14;15!UBERON:0002390;1.18e-09;32!UBERON:0002193;1.66e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.01e-14,15;UBERON:0000179,5.01e-14,15;UBERON:0000463,5.01e-14,15;UBERON:0002193,4.33e-07,108 | |||
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| ||
|short_description=p3@TTC39C | |short_description=p3@TTC39C | ||
}} | }} |
Latest revision as of 00:33, 19 September 2015
Short description: | p3@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TTC39C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 139bp_to_ENST00000317571, NM_001135993, NM_001243425, uc002kuv.2, uc002kuw.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.38e-38 | 53 |
common lymphoid progenitor | 2.38e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-37 | 52 |
nongranular leukocyte | 5.16e-26 | 115 |
leukocyte | 2.59e-25 | 136 |
hematopoietic stem cell | 4.43e-25 | 168 |
hematopoietic cell | 5.00e-24 | 177 |
mature alpha-beta T cell | 3.39e-23 | 18 |
alpha-beta T cell | 3.39e-23 | 18 |
immature T cell | 3.39e-23 | 18 |
mature T cell | 3.39e-23 | 18 |
immature alpha-beta T cell | 3.39e-23 | 18 |
hematopoietic oligopotent progenitor cell | 3.12e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.03e-19 | 120 |
T cell | 1.64e-19 | 25 |
pro-T cell | 1.64e-19 | 25 |
lymphocyte of B lineage | 1.41e-15 | 24 |
pro-B cell | 1.41e-15 | 24 |
CD8-positive, alpha-beta T cell | 2.04e-14 | 11 |
B cell | 2.82e-14 | 14 |
CD4-positive, alpha-beta T cell | 2.30e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 5.01e-14 | 15 |
haemolymphatic fluid | 5.01e-14 | 15 |
organism substance | 5.01e-14 | 15 |
hemolymphoid system | 4.33e-07 | 108 |