FFCP PHASE1:Hg19::chr11:118305244..118305255,+: Difference between revisions
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|id=chr11:118305244..118305255,+
|short_description=p@chr11:118305244..118305255,+
|description=CAGE_peak_at_chr11:118305244..118305255,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:118305244..118305255,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr11:118305244..118305255,+ | |||
|id=chr11:118305244..118305255,+ | |||
|ontology_enrichment_celltype=CL:0000242!6.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.26e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!5.16e-36!59;UBERON:0000955!7.16e-36!69;UBERON:0006238!7.16e-36!69;UBERON:0001017!1.25e-35!82;UBERON:0001049!1.07e-34!57;UBERON:0005068!1.07e-34!57;UBERON:0006241!1.07e-34!57;UBERON:0007135!1.07e-34!57;UBERON:0005743!1.45e-33!86;UBERON:0000073!1.66e-33!94;UBERON:0001016!1.66e-33!94;UBERON:0001869!2.13e-33!32;UBERON:0002020!3.09e-31!34;UBERON:0003528!3.09e-31!34;UBERON:0001893!3.71e-31!34;UBERON:0002780!1.08e-30!41;UBERON:0001890!1.08e-30!41;UBERON:0006240!1.08e-30!41;UBERON:0003080!7.89e-30!42;UBERON:0002791!3.07e-29!33;UBERON:0002619!1.26e-28!22;UBERON:0001950!1.42e-27!20;UBERON:0000956!7.79e-25!25;UBERON:0000203!7.79e-25!25;UBERON:0002346!2.45e-24!90;UBERON:0003075!3.74e-22!86;UBERON:0007284!3.74e-22!86;UBERON:0003056!1.23e-20!61;UBERON:0000033!1.34e-20!123;UBERON:0000924!1.31e-19!173;UBERON:0006601!1.31e-19!173;UBERON:0000153!3.18e-19!129;UBERON:0007811!3.18e-19!129;UBERON:0004121!7.39e-18!169;UBERON:0007023!2.65e-11!115;UBERON:0002021!1.29e-09!5;UBERON:0001872!1.62e-09!5;UBERON:0001871!4.25e-09!7;UBERON:0002037!1.27e-08!6;UBERON:0006215!1.27e-08!6;UBERON:0004733!2.51e-08!12;UBERON:0002028!2.51e-08!12;UBERON:0007277!2.51e-08!12;UBERON:0002680!2.68e-08!9;UBERON:0001895!2.68e-08!9;UBERON:0010092!2.68e-08!9;UBERON:0002420!4.26e-08!9;UBERON:0007245!4.26e-08!9;UBERON:0010009!4.26e-08!9;UBERON:0010011!4.26e-08!9;UBERON:0000454!4.26e-08!9;UBERON:0002308!7.26e-08!9;UBERON:0000125!7.26e-08!9;UBERON:0004732!1.25e-07!13;UBERON:0000369!2.00e-07!4;UBERON:0002435!2.00e-07!4;UBERON:0000204!2.00e-07!4;UBERON:0010082!2.00e-07!4;UBERON:0000200!2.15e-07!6;UBERON:0009663!6.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.10e-59;6!UBERON:0002680;3.55e-40;9!UBERON:0001895;3.55e-40;9!UBERON:0004733;2.11e-30;12!UBERON:0002028;2.11e-30;12!UBERON:0004732;3.82e-28;13!UBERON:0002114;1.60e-14;2!UBERON:0002108;2.97e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0002680,3.80e-40,9;UBERON:0001895,3.80e-40,9;UBERON:0010092,3.80e-40,9;UBERON:0004733,2.22e-30,12;UBERON:0002028,2.22e-30,12;UBERON:0007277,2.22e-30,12;UBERON:0004732,4.00e-28,13;UBERON:0003076,1.65e-24,15;UBERON:0003057,1.65e-24,15;UBERON:0002114,1.60e-14,2;UBERON:0002108,2.97e-09,4;UBERON:0000073,2.08e-07,53;UBERON:0002616,2.08e-07,53;UBERON:0001049,4.68e-07,56;UBERON:0005068,4.68e-07,56;UBERON:0006241,4.68e-07,56;UBERON:0007135,4.68e-07,56 | |||
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| ||
|short_description=p@chr11:118305244..118305255,+ | |||
}} | }} |
Latest revision as of 18:46, 23 July 2015
Short description: | p@chr11:118305244..118305255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118305244..118305255, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
duodenum | 1.60e-14 | 2 |
small intestine | 2.97e-09 | 4 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |