FFCP PHASE1:Hg19::chr13:42269057..42269068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_AK130122_5end | |association_with_transcript=228bp_to_AK130122_5end | ||
|cluster_id=chr13:42269057..42269068,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_3_at_AK130122_5end | |description=CAGE_peak_3_at_AK130122_5end | ||
|id=chr13:42269057..42269068,- | |id=chr13:42269057..42269068,- | ||
|ontology_enrichment_celltype=CL:0002057!8.69e-24!42;CL:0000860!6.48e-22!45;CL:0002194!5.10e-16!63;CL:0000576!5.10e-16!63;CL:0000040!5.10e-16!63;CL:0000559!5.10e-16!63;CL:0000766!5.55e-16!76;CL:0002009!2.13e-15!65;CL:0000839!5.29e-14!70;CL:0000557!9.53e-14!71;CL:0000842!5.33e-12!3;CL:0002087!9.47e-12!119;CL:0000738!2.23e-11!140;CL:0002320!1.90e-09!365;CL:0000763!2.38e-09!112;CL:0000049!2.38e-09!112;CL:0000224!4.11e-09!4;CL:0000134!4.32e-09!358;CL:0000219!7.88e-09!390;CL:0000037!3.38e-08!172;CL:0000566!3.38e-08!172;CL:0002031!6.77e-08!124;CL:0000988!1.92e-07!182;CL:0000034!2.30e-07!444;CL:0000048!3.02e-07!430;CL:0000723!5.11e-07!436 | |ontology_enrichment_celltype=CL:0002057!8.69e-24!42;CL:0000860!6.48e-22!45;CL:0002194!5.10e-16!63;CL:0000576!5.10e-16!63;CL:0000040!5.10e-16!63;CL:0000559!5.10e-16!63;CL:0000766!5.55e-16!76;CL:0002009!2.13e-15!65;CL:0000839!5.29e-14!70;CL:0000557!9.53e-14!71;CL:0000842!5.33e-12!3;CL:0002087!9.47e-12!119;CL:0000738!2.23e-11!140;CL:0002320!1.90e-09!365;CL:0000763!2.38e-09!112;CL:0000049!2.38e-09!112;CL:0000224!4.11e-09!4;CL:0000134!4.32e-09!358;CL:0000219!7.88e-09!390;CL:0000037!3.38e-08!172;CL:0000566!3.38e-08!172;CL:0002031!6.77e-08!124;CL:0000988!1.92e-07!182;CL:0000034!2.30e-07!444;CL:0000048!3.02e-07!430;CL:0000723!5.11e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.01e-17;6!CL:0002397;2.01e-17;6!CL:0000062;3.74e-12;9!CL:0000576;4.71e-09;48!CL:0000860;2.64e-07;33!CL:0002057;2.64e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.75e-15,42;CL:0002057,5.75e-15,42;CL:0000473,3.93e-13,48;CL:0000234,3.93e-13,48;CL:0002393,5.52e-12,9;CL:0002397,5.52e-12,9;CL:0002194,1.48e-10,59;CL:0000576,1.48e-10,59;CL:0000040,1.48e-10,59;CL:0000559,1.48e-10,59;CL:0002009,3.19e-10,61;CL:0000062,4.03e-10,11;CL:0000375,4.03e-10,11;CL:0000335,4.03e-10,11;CL:0000839,1.78e-09,66;CL:0000557,2.44e-09,67;CL:0000766,1.03e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-10;42!CL:0000335;4.03e-10;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.11e-13!86;UBERON:0002390!3.48e-13!102;UBERON:0003061!3.48e-13!102;UBERON:0004765!3.32e-12!101;UBERON:0001434!3.32e-12!101;UBERON:0002371!9.78e-12!80;UBERON:0002193!1.51e-11!112;UBERON:0002384!6.01e-09!375;UBERON:0002405!7.56e-08!115;UBERON:0002204!5.44e-07!167 | |ontology_enrichment_uberon=UBERON:0001474!1.11e-13!86;UBERON:0002390!3.48e-13!102;UBERON:0003061!3.48e-13!102;UBERON:0004765!3.32e-12!101;UBERON:0001434!3.32e-12!101;UBERON:0002371!9.78e-12!80;UBERON:0002193!1.51e-11!112;UBERON:0002384!6.01e-09!375;UBERON:0002405!7.56e-08!115;UBERON:0002204!5.44e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.11e-14,82;UBERON:0004765,2.15e-13,90;UBERON:0001434,4.53e-12,100;UBERON:0002371,2.87e-08,76;UBERON:0002204,3.15e-07,167;UBERON:0002405,8.45e-07,93 | |||
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| ||
|short_description=p3@AK130122 | |short_description=p3@AK130122 | ||
}} | }} |
Latest revision as of 16:04, 24 July 2015
Short description: | p3@AK130122 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK130122_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | 228bp_to_AK130122_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.75e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.75e-15 | 42 |
defensive cell | 3.93e-13 | 48 |
phagocyte | 3.93e-13 | 48 |
intermediate monocyte | 5.52e-12 | 9 |
CD14-positive, CD16-positive monocyte | 5.52e-12 | 9 |
monopoietic cell | 1.48e-10 | 59 |
monocyte | 1.48e-10 | 59 |
monoblast | 1.48e-10 | 59 |
promonocyte | 1.48e-10 | 59 |
macrophage dendritic cell progenitor | 3.19e-10 | 61 |
osteoblast | 4.03e-10 | 11 |
osteoprogenitor cell | 4.03e-10 | 11 |
mesenchyme condensation cell | 4.03e-10 | 11 |
myeloid lineage restricted progenitor cell | 1.78e-09 | 66 |
granulocyte monocyte progenitor cell | 2.44e-09 | 67 |
myeloid leukocyte | 1.03e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.11e-14 | 82 |
skeletal element | 2.15e-13 | 90 |
skeletal system | 4.53e-12 | 100 |
bone marrow | 2.87e-08 | 76 |
musculoskeletal system | 3.15e-07 | 167 |
immune system | 8.45e-07 | 93 |