FFCP PHASE1:Hg19::chr13:46716934..46716959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUA0 | |UniProt=B4DUA0 | ||
|association_with_transcript=55bp_to_ENST00000435666,uc010ack.2_5end | |association_with_transcript=55bp_to_ENST00000435666,uc010ack.2_5end | ||
|cluster_id=chr13:46716934..46716959,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_13_at_LCP1_5end | |description=CAGE_peak_13_at_LCP1_5end | ||
|id=chr13:46716934..46716959,- | |id=chr13:46716934..46716959,- | ||
|ontology_enrichment_celltype=CL:0000181!3.47e-12!12;CL:0000417!3.47e-12!12;CL:0000668!3.47e-12!12;CL:0000414!3.47e-12!12;CL:0000412!3.47e-12!12;CL:0000182!3.47e-12!12 | |ontology_enrichment_celltype=CL:0000181!3.47e-12!12;CL:0000417!3.47e-12!12;CL:0000668!3.47e-12!12;CL:0000414!3.47e-12!12;CL:0000412!3.47e-12!12;CL:0000182!3.47e-12!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.46e-27;12!CL:0002535;2.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.46e-27,12;CL:0002535,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.34e-17;11!UBERON:0009497;2.49e-14;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.27e-17!8;UBERON:0005057!9.00e-17!26;UBERON:0001049!3.98e-15!57;UBERON:0005068!3.98e-15!57;UBERON:0006241!3.98e-15!57;UBERON:0007135!3.98e-15!57;UBERON:0002107!4.73e-13!19;UBERON:0006925!4.73e-13!19;UBERON:0008836!4.73e-13!19;UBERON:0006331!1.86e-12!3;UBERON:0000988!2.87e-12!3;UBERON:0007023!3.78e-12!115;UBERON:0003076!4.22e-12!15;UBERON:0003057!4.22e-12!15;UBERON:0005743!2.54e-11!86;UBERON:0000073!3.29e-11!94;UBERON:0001016!3.29e-11!94;UBERON:0008835!4.47e-11!22;UBERON:0003894!4.47e-11!22;UBERON:0002616!6.51e-11!59;UBERON:0002346!1.02e-10!90;UBERON:0001017!1.30e-10!82;UBERON:0009854!1.56e-10!23;UBERON:0000955!3.78e-10!69;UBERON:0006238!3.78e-10!69;UBERON:0003075!4.31e-10!86;UBERON:0007284!4.31e-10!86;UBERON:0002368!6.61e-10!35;UBERON:0003929!8.22e-10!54;UBERON:0007499!1.41e-09!25;UBERON:0009497!1.41e-09!25;UBERON:0000015!1.41e-09!25;UBERON:0002423!1.41e-09!25;UBERON:0006235!1.41e-09!25;UBERON:0004161!1.41e-09!25;UBERON:0009856!3.74e-09!26;UBERON:0001897!8.69e-09!2;UBERON:0002148!8.69e-09!2;UBERON:0009662!8.69e-09!2;UBERON:0004733!4.81e-08!12;UBERON:0002028!4.81e-08!12;UBERON:0007277!4.81e-08!12;UBERON:0002365!1.88e-07!31;UBERON:0002330!1.88e-07!31;UBERON:0004732!2.12e-07!13;UBERON:0002530!2.39e-07!59;UBERON:0000949!2.88e-07!45;UBERON:0002780!4.03e-07!41;UBERON:0001890!4.03e-07!41;UBERON:0006240!4.03e-07!41;UBERON:0002308!4.48e-07!9;UBERON:0000125!4.48e-07!9;UBERON:0000153!5.18e-07!129;UBERON:0007811!5.18e-07!129;UBERON:0003080!6.49e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-37;19!UBERON:0006925;2.32e-37;19!UBERON:0002423;1.98e-28;25!UBERON:0002365;5.20e-23;31!UBERON:0002330;5.20e-23;31!UBERON:0002368;1.33e-19;33!UBERON:0000949;7.09e-15;43!UBERON:0006955;2.02e-11;2!UBERON:0004801;2.02e-11;2!UBERON:0005172;2.36e-10;52!UBERON:0005173;2.36e-10;52!UBERON:0002417;6.37e-08;58!UBERON:0000916;6.37e-08;58!UBERON:0002530;6.85e-08;57!UBERON:0001007;8.57e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-37,19;UBERON:0006925,2.32e-37,19;UBERON:0008836,2.32e-37,19;UBERON:0008835,2.74e-32,22;UBERON:0003894,2.74e-32,22;UBERON:0009854,6.85e-31,23;UBERON:0007499,1.98e-28,25;UBERON:0009497,1.98e-28,25;UBERON:0000015,1.98e-28,25;UBERON:0002423,1.98e-28,25;UBERON:0006235,1.98e-28,25;UBERON:0004161,1.98e-28,25;UBERON:0009856,2.43e-27,26;UBERON:0002365,6.03e-23,31;UBERON:0002330,6.03e-23,31;UBERON:0002368,2.49e-20,35;UBERON:0000949,8.13e-16,45;UBERON:0003929,3.56e-13,54;UBERON:0005172,3.56e-13,54;UBERON:0005173,3.56e-13,54;UBERON:0002530,4.71e-12,59;UBERON:0002417,7.50e-12,60;UBERON:0000916,7.50e-12,60;UBERON:0006955,2.02e-11,2;UBERON:0004801,2.02e-11,2;UBERON:0005911,1.21e-08,82;UBERON:0001041,3.88e-08,87;UBERON:0005177,5.51e-07,101 | |||
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| ||
|short_description=p13@LCP1 | |short_description=p13@LCP1 | ||
}} | }} |
Latest revision as of 13:33, 17 September 2015
Short description: | p13@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LCP1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 55bp_to_ENST00000435666, uc010ack.2_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | B4DUA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.46e-27 | 12 |
epithelial cell of cervix | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-37 | 19 |
digestive gland | 2.32e-37 | 19 |
liver bud | 2.32e-37 | 19 |
hepatic diverticulum | 2.74e-32 | 22 |
liver primordium | 2.74e-32 | 22 |
digestive tract diverticulum | 6.85e-31 | 23 |
epithelial sac | 1.98e-28 | 25 |
epithelium of foregut-midgut junction | 1.98e-28 | 25 |
anatomical boundary | 1.98e-28 | 25 |
hepatobiliary system | 1.98e-28 | 25 |
foregut-midgut junction | 1.98e-28 | 25 |
septum transversum | 1.98e-28 | 25 |
sac | 2.43e-27 | 26 |
exocrine gland | 6.03e-23 | 31 |
exocrine system | 6.03e-23 | 31 |
endocrine gland | 2.49e-20 | 35 |
endocrine system | 8.13e-16 | 45 |
gut epithelium | 3.56e-13 | 54 |
abdomen element | 3.56e-13 | 54 |
abdominal segment element | 3.56e-13 | 54 |
gland | 4.71e-12 | 59 |
abdominal segment of trunk | 7.50e-12 | 60 |
abdomen | 7.50e-12 | 60 |
uterine epithelium | 2.02e-11 | 2 |
cervix epithelium | 2.02e-11 | 2 |
endo-epithelium | 1.21e-08 | 82 |
foregut | 3.88e-08 | 87 |
trunk region element | 5.51e-07 | 101 |