FFCP PHASE1:Hg19::chr11:12188702..12188706,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:12188702..12188706,-
|short_description=p@chr11:12188702..12188706,-
|description=CAGE_peak_at_chr11:12188702..12188706,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12188702..12188706,- | |||
|description=CAGE_peak_at_chr11:12188702..12188706,- | |||
|id=chr11:12188702..12188706,- | |||
|ontology_enrichment_celltype=CL:0000548!6.29e-10!679;CL:0000004!6.29e-10!679;CL:0000255!6.29e-10!679;CL:0000012!1.04e-09!682;CL:0002368!1.61e-09!13;CL:0000220!9.80e-09!246;CL:0002321!1.59e-08!248;CL:0000144!3.86e-08!625;CL:0000066!1.47e-07!254;CL:0000003!2.22e-07!722;CL:0002371!2.57e-07!591;CL:0000244!3.26e-07!4;CL:0000731!3.26e-07!4;CL:0002159!3.59e-07!13;CL:0000063!3.98e-07!578;CL:0002057!4.85e-07!42;CL:0000076!6.65e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.51e-23;4!CL:0000731;2.51e-23;4!CL:0000317;6.85e-12;2!CL:1000448;6.85e-12;2!CL:0002308;6.85e-12;2!CL:0002140;6.85e-12;2!CL:0002159;1.45e-09;14!CL:0002328;1.66e-08;3!CL:0002166;3.24e-08;3!CL:0002621;3.24e-08;3!CL:0002368;3.59e-07;13!CL:0000319;4.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.27e-23,4;CL:0000731,3.27e-23,4;CL:0000317,1.13e-11,2;CL:1000448,1.13e-11,2;CL:0002308,1.13e-11,2;CL:0002140,1.13e-11,2;CL:0002159,2.15e-09,14;CL:0002328,1.93e-08,3;CL:0002621,2.16e-08,3;CL:0002166,3.76e-08,3;CL:0002368,3.37e-07,13;CL:0000319,4.51e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;4.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005910!1.45e-08!6;UBERON:0000365!8.15e-08!5;UBERON:0003914!1.08e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.06e-18;5!UBERON:0000486;1.81e-16;12!UBERON:0005910;1.30e-15;6!UBERON:0002419;6.85e-12;2!UBERON:0007771;6.85e-12;2!UBERON:0003297;6.85e-12;2!UBERON:0001821;6.85e-12;2!UBERON:0003487;6.85e-12;2!UBERON:0001820;6.85e-12;2!UBERON:0004815;1.66e-08;3!UBERON:0002031;1.66e-08;3!UBERON:0005911;2.29e-08;36!UBERON:0001949;3.24e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.30e-18,5;UBERON:0005910,1.54e-15,6;UBERON:0002419,1.13e-11,2;UBERON:0007771,1.13e-11,2;UBERON:0003297,1.13e-11,2;UBERON:0001821,1.13e-11,2;UBERON:0003487,1.13e-11,2;UBERON:0001820,1.13e-11,2;UBERON:0005089,1.13e-11,2;UBERON:0005088,1.13e-11,2;UBERON:0004815,1.93e-08,3;UBERON:0002031,1.93e-08,3;UBERON:0001949,2.16e-08,3 | |||
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| ||
|short_description=p@chr11:12188702..12188706,- | |||
}} | }} |
Latest revision as of 19:14, 23 July 2015
Short description: | p@chr11:12188702..12188706, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12188702..12188706, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.27e-23 | 4 |
urothelial cell | 3.27e-23 | 4 |
sebum secreting cell | 1.13e-11 | 2 |
epithelial cell of sweat gland | 1.13e-11 | 2 |
epithelial cell of skin gland | 1.13e-11 | 2 |
acinar cell of sebaceous gland | 1.13e-11 | 2 |
general ecto-epithelial cell | 2.15e-09 | 14 |
bronchial epithelial cell | 1.93e-08 | 3 |
gingival epithelial cell | 2.16e-08 | 3 |
epithelial cell of Malassez | 3.76e-08 | 3 |
respiratory epithelial cell | 3.37e-07 | 13 |
mucus secreting cell | 4.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.30e-18 | 5 |
transitional epithelium | 1.54e-15 | 6 |
skin gland | 1.13e-11 | 2 |
epidermis gland | 1.13e-11 | 2 |
gland of integumental system | 1.13e-11 | 2 |
sebaceous gland | 1.13e-11 | 2 |
skin sebaceous gland | 1.13e-11 | 2 |
sweat gland | 1.13e-11 | 2 |
sweat gland placode | 1.13e-11 | 2 |
sebaceous gland placode | 1.13e-11 | 2 |
lower respiratory tract epithelium | 1.93e-08 | 3 |
epithelium of bronchus | 1.93e-08 | 3 |
gingival epithelium | 2.16e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.51e-07 | 1 |