FFCP PHASE1:Hg19::chr19:43576091..43576105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5670 | |EntrezGene=5670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9519 | |HGNC=9519 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UML9 | |UniProt=Q9UML9 | ||
|association_with_transcript=-3bp_to_M37398_5end | |association_with_transcript=-3bp_to_M37398_5end | ||
|cluster_id=chr19:43576091..43576105,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_2_at_PSG2_5end | |description=CAGE_peak_2_at_PSG2_5end | ||
|id=chr19:43576091..43576105,- | |id=chr19:43576091..43576105,- | ||
|ontology_enrichment_celltype=CL:0002541!2.67e-30!3 | |ontology_enrichment_celltype=CL:0002541!2.67e-30!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.39e-53;3!CL:0000349;2.56e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.39e-53,3;CL:0000349,2.56e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.21e-40;1!UBERON:0004872;5.54e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.67e-30!3;UBERON:0000920!2.67e-30!3;UBERON:0003124!5.13e-29!7;UBERON:0005631!1.53e-25!14;UBERON:0000158!1.53e-25!14;UBERON:0000478!4.11e-15!24;UBERON:0001987!7.27e-07!4;UBERON:0004340!7.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.39e-53;3!UBERON:0000920;6.39e-53;3!UBERON:0005631;9.54e-17;10!UBERON:0000158;9.54e-17;10!UBERON:0000478;1.34e-15;24!UBERON:0001987;2.94e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.39e-53,3;UBERON:0003124,5.43e-51,7;UBERON:0005631,4.86e-26,14;UBERON:0000158,4.86e-26,14;UBERON:0000478,1.38e-15,24;UBERON:0001987,3.10e-11,4;UBERON:0004340,3.10e-11,4 | |||
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|short_description=p2@PSG2 | |short_description=p2@PSG2 | ||
}} | }} |
Latest revision as of 10:27, 18 September 2015
Short description: | p2@PSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PSG2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -3bp_to_M37398_5end |
EntrezGene: | PSG2 |
HGNC: | 9519 |
UniProt: | Q9UML9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.39e-53 | 3 |
extraembryonic cell | 2.56e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.39e-53 | 3 |
chorion | 5.43e-51 | 7 |
extraembryonic membrane | 4.86e-26 | 14 |
membranous layer | 4.86e-26 | 14 |
extraembryonic structure | 1.38e-15 | 24 |
placenta | 3.10e-11 | 4 |
allantois | 3.10e-11 | 4 |