FFCP PHASE1:Hg19::chr1:1005339..1005350,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1005339..1005350,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr1:1005339..1005350,- | |description=CAGE_peak_at_chr1:1005339..1005350,- | ||
|id=chr1:1005339..1005350,- | |id=chr1:1005339..1005350,- | ||
|ontology_enrichment_celltype=CL:0002057!1.42e-27!42;CL:0000860!2.24e-25!45;CL:0000738!5.92e-22!140;CL:0000766!4.70e-21!76;CL:0000557!4.86e-19!71;CL:0002087!1.06e-17!119;CL:0000839!1.52e-17!70;CL:0002009!1.97e-17!65;CL:0002031!9.29e-17!124;CL:0002194!2.78e-16!63;CL:0000576!2.78e-16!63;CL:0000040!2.78e-16!63;CL:0000559!2.78e-16!63;CL:0000037!3.25e-16!172;CL:0000566!3.25e-16!172;CL:0000988!7.68e-15!182;CL:0002032!7.51e-14!165;CL:0000837!7.51e-14!165;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000767!1.42e-10!3;CL:0000623!1.79e-10!3;CL:0000825!1.79e-10!3;CL:0000842!3.90e-10!3;CL:0000224!1.05e-07!4 | |ontology_enrichment_celltype=CL:0002057!1.42e-27!42;CL:0000860!2.24e-25!45;CL:0000738!5.92e-22!140;CL:0000766!4.70e-21!76;CL:0000557!4.86e-19!71;CL:0002087!1.06e-17!119;CL:0000839!1.52e-17!70;CL:0002009!1.97e-17!65;CL:0002031!9.29e-17!124;CL:0002194!2.78e-16!63;CL:0000576!2.78e-16!63;CL:0000040!2.78e-16!63;CL:0000559!2.78e-16!63;CL:0000037!3.25e-16!172;CL:0000566!3.25e-16!172;CL:0000988!7.68e-15!182;CL:0002032!7.51e-14!165;CL:0000837!7.51e-14!165;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000767!1.42e-10!3;CL:0000623!1.79e-10!3;CL:0000825!1.79e-10!3;CL:0000842!3.90e-10!3;CL:0000224!1.05e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002393;9.71e-20;6!CL:0002397;9.71e-20;6!CL:0000236;2.68e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.27e-13,9;CL:0002397,2.27e-13,9;CL:0000860,1.65e-10,42;CL:0002057,1.65e-10,42;CL:0000473,3.77e-09,48;CL:0000234,3.77e-09,48;CL:0000236,1.01e-08,14;CL:0000738,5.90e-08,136;CL:0000766,7.74e-08,72;CL:0002087,8.73e-08,115;CL:0002031,2.03e-07,120;CL:0002194,3.04e-07,59;CL:0000576,3.04e-07,59;CL:0000040,3.04e-07,59;CL:0000559,3.04e-07,59;CL:0002009,5.36e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.18e-13;1!CL:0002057;1.33e-08;42!UBERON:0008814;1.81e-07;2!UBERON:0010056;1.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.45e-17!102;UBERON:0003061!9.45e-17!102;UBERON:0002371!2.93e-16!80;UBERON:0002193!4.59e-16!112;UBERON:0001474!9.87e-15!86;UBERON:0002405!8.74e-12!115;UBERON:0004765!1.02e-11!101;UBERON:0001434!1.02e-11!101;UBERON:0003081!5.53e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:1005339..1005350,- | |short_description=p@chr1:1005339..1005350,- | ||
}} | }} |
Latest revision as of 18:54, 27 July 2015
Short description: | p@chr1:1005339..1005350, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1005339..1005350, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.27e-13 | 9 |
CD14-positive, CD16-positive monocyte | 2.27e-13 | 9 |
classical monocyte | 1.65e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-10 | 42 |
defensive cell | 3.77e-09 | 48 |
phagocyte | 3.77e-09 | 48 |
B cell | 1.01e-08 | 14 |
leukocyte | 5.90e-08 | 136 |
myeloid leukocyte | 7.74e-08 | 72 |
nongranular leukocyte | 8.73e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.03e-07 | 120 |
monopoietic cell | 3.04e-07 | 59 |
monocyte | 3.04e-07 | 59 |
monoblast | 3.04e-07 | 59 |
promonocyte | 3.04e-07 | 59 |
macrophage dendritic cell progenitor | 5.36e-07 | 61 |