FFCP PHASE1:Hg19::chr11:20048963..20048970,+: Difference between revisions
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|id=chr11:20048963..20048970,+
|short_description=p34@NAV2
|description=CAGE_peak_34_at_NAV2_5end
|association_with_transcript=-129bp_to_ENST00000526675_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89797 | |EntrezGene=89797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15997 | |HGNC=15997 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_ENST00000526675_5end | |||
|cluster_id=chr11:20048963..20048970,+ | |||
|description=CAGE_peak_34_at_NAV2_5end | |||
|id=chr11:20048963..20048970,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.02e-11!7;CL:0000586!1.02e-11!7;CL:0002541!4.62e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.51e-53;3!CL:0000349;2.21e-09;19!CL:0000039;5.22e-07;7!CL:0000586;5.22e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.87e-53,3;CL:0000349,2.26e-09,19;CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!9.77e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.21e-40;1!DOID:1357;2.21e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.21e-40,1;DOID:1357,2.21e-40,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!7.53e-12!12;UBERON:0000476!4.62e-11!3;UBERON:0000920!4.62e-11!3;UBERON:0003729!2.44e-10!5;UBERON:0003124!4.24e-08!7;UBERON:0005631!4.42e-08!14;UBERON:0000158!4.42e-08!14;UBERON:0003343!6.05e-08!4;UBERON:0004785!6.05e-08!4;UBERON:0000200!7.51e-08!6;UBERON:0000974!8.71e-08!10;UBERON:0000153!1.93e-07!129;UBERON:0007811!1.93e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.51e-53;3!UBERON:0000920;2.51e-53;3!UBERON:0001764;2.21e-40;1!UBERON:0001825;2.21e-40;1!UBERON:0005631;7.21e-17;10!UBERON:0000158;7.21e-17;10!UBERON:0000478;1.25e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.87e-53,3;UBERON:0001764,2.21e-40,1;UBERON:0001825,2.21e-40,1;UBERON:0003124,1.44e-23,7;UBERON:0005631,2.37e-12,14;UBERON:0000158,2.37e-12,14;UBERON:0000478,1.27e-07,24 | |||
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| ||
|short_description=p34@NAV2 | |||
}} | }} |
Latest revision as of 05:45, 17 September 2015
Short description: | p34@NAV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_NAV2_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000526675_5end |
EntrezGene: | NAV2 |
HGNC: | 15997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.87e-53 | 3 |
extraembryonic cell | 2.26e-09 | 19 |
germ line cell | 5.38e-07 | 7 |
germ cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.87e-53 | 3 |
maxillary sinus | 2.21e-40 | 1 |
paranasal sinus | 2.21e-40 | 1 |
chorion | 1.44e-23 | 7 |
extraembryonic membrane | 2.37e-12 | 14 |
membranous layer | 2.37e-12 | 14 |
extraembryonic structure | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.21e-40 | 1 |
maxillary sinus cancer | 2.21e-40 | 1 |