FFCP PHASE1:Hg19::chr11:22688234..22688267,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:22688234..22688267,+
|short_description=p6@GAS2
|description=CAGE_peak_6_at_GAS2_5end
|association_with_transcript=73bp_to_ENST00000454584_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2620 | |EntrezGene=2620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4167 | |HGNC=4167 | ||
|TSSclassifier=strong | |||
|UniProt=O43903 | |UniProt=O43903 | ||
|association_with_transcript=73bp_to_ENST00000454584_5end | |||
|cluster_id=chr11:22688234..22688267,+ | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_6_at_GAS2_5end | |||
|id=chr11:22688234..22688267,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.00e-08!12;CL:0000417!4.00e-08!12;CL:0000668!4.00e-08!12;CL:0000414!4.00e-08!12;CL:0000412!4.00e-08!12;CL:0000182!4.00e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.48e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.55e-28,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.32e-22;11!UBERON:0009497;1.74e-18;13!UBERON:0003104;2.65e-12;31!UBERON:0001041;1.81e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;1.95e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.02e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.68e-28!57;UBERON:0005068!9.68e-28!57;UBERON:0006241!9.68e-28!57;UBERON:0007135!9.68e-28!57;UBERON:0002780!2.48e-23!41;UBERON:0001890!2.48e-23!41;UBERON:0006240!2.48e-23!41;UBERON:0007023!2.52e-23!115;UBERON:0003080!1.45e-22!42;UBERON:0002020!2.81e-22!34;UBERON:0003528!2.81e-22!34;UBERON:0001893!1.02e-21!34;UBERON:0002616!1.42e-21!59;UBERON:0003075!5.73e-21!86;UBERON:0007284!5.73e-21!86;UBERON:0000073!9.52e-21!94;UBERON:0001016!9.52e-21!94;UBERON:0002346!1.01e-20!90;UBERON:0002791!1.21e-20!33;UBERON:0001017!5.10e-20!82;UBERON:0001869!6.47e-20!32;UBERON:0005743!1.63e-19!86;UBERON:0002619!4.05e-17!22;UBERON:0000955!1.60e-16!69;UBERON:0006238!1.60e-16!69;UBERON:0001950!1.13e-14!20;UBERON:0000956!1.65e-14!25;UBERON:0000203!1.65e-14!25;UBERON:0000025!6.69e-14!194;UBERON:0003056!8.12e-14!61;UBERON:0000924!1.68e-13!173;UBERON:0006601!1.68e-13!173;UBERON:0004121!2.11e-13!169;UBERON:0000153!6.41e-12!129;UBERON:0007811!6.41e-12!129;UBERON:0000119!1.24e-11!312;UBERON:0000483!1.79e-11!309;UBERON:0004111!3.80e-11!241;UBERON:0000033!6.54e-10!123;UBERON:0002308!1.33e-09!9;UBERON:0000125!1.33e-09!9;UBERON:0000481!2.21e-09!347;UBERON:0000477!4.11e-09!286;UBERON:0000475!1.30e-08!365;UBERON:0005057!4.73e-08!26;UBERON:0001872!6.68e-08!5;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0002107!3.37e-07!19;UBERON:0006925!3.37e-07!19;UBERON:0008836!3.37e-07!19;UBERON:0009663!4.97e-07!7;UBERON:0002368!6.64e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.86e-28;19!UBERON:0006925;5.86e-28;19!UBERON:0002423;6.35e-21;25!UBERON:0002368;4.27e-17;33!UBERON:0002365;3.86e-16;31!UBERON:0002330;3.86e-16;31!UBERON:0000949;2.07e-13;43!UBERON:0007029;4.40e-08;1!UBERON:0005172;8.90e-08;52!UBERON:0005173;8.90e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.50e-28,19;UBERON:0006925,3.50e-28,19;UBERON:0008836,3.50e-28,19;UBERON:0008835,3.74e-24,22;UBERON:0003894,3.74e-24,22;UBERON:0009854,4.81e-23,23;UBERON:0007499,4.32e-21,25;UBERON:0009497,4.32e-21,25;UBERON:0000015,4.32e-21,25;UBERON:0002423,4.32e-21,25;UBERON:0006235,4.32e-21,25;UBERON:0004161,4.32e-21,25;UBERON:0009856,3.16e-20,26;UBERON:0002368,3.66e-18,35;UBERON:0000949,8.96e-17,45;UBERON:0002365,9.68e-17,31;UBERON:0002330,9.68e-17,31;UBERON:0005172,3.11e-11,54;UBERON:0005173,3.11e-11,54;UBERON:0003929,3.51e-11,54;UBERON:0001041,4.71e-11,87;UBERON:0005177,7.19e-11,101;UBERON:0002530,4.31e-10,59;UBERON:0002417,6.09e-10,60;UBERON:0000916,6.09e-10,60;UBERON:0004921,1.02e-08,118;UBERON:0005911,2.45e-08,82;UBERON:0007029,3.10e-08,1;UBERON:0009569,4.45e-08,112 | |||
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| ||
|short_description=p6@GAS2 | |||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p6@GAS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAS2_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 73bp_to_ENST00000454584_5end |
EntrezGene: | GAS2 |
HGNC: | 4167 |
UniProt: | O43903 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.55e-28 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.50e-28 | 19 |
digestive gland | 3.50e-28 | 19 |
liver bud | 3.50e-28 | 19 |
hepatic diverticulum | 3.74e-24 | 22 |
liver primordium | 3.74e-24 | 22 |
digestive tract diverticulum | 4.81e-23 | 23 |
epithelial sac | 4.32e-21 | 25 |
epithelium of foregut-midgut junction | 4.32e-21 | 25 |
anatomical boundary | 4.32e-21 | 25 |
hepatobiliary system | 4.32e-21 | 25 |
foregut-midgut junction | 4.32e-21 | 25 |
septum transversum | 4.32e-21 | 25 |
sac | 3.16e-20 | 26 |
endocrine gland | 3.66e-18 | 35 |
endocrine system | 8.96e-17 | 45 |
exocrine gland | 9.68e-17 | 31 |
exocrine system | 9.68e-17 | 31 |
abdomen element | 3.11e-11 | 54 |
abdominal segment element | 3.11e-11 | 54 |
gut epithelium | 3.51e-11 | 54 |
foregut | 4.71e-11 | 87 |
trunk region element | 7.19e-11 | 101 |
gland | 4.31e-10 | 59 |
abdominal segment of trunk | 6.09e-10 | 60 |
abdomen | 6.09e-10 | 60 |
subdivision of digestive tract | 1.02e-08 | 118 |
endo-epithelium | 2.45e-08 | 82 |
surface | 3.10e-08 | 1 |
subdivision of trunk | 4.45e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.02e-08 | 1 |