FFCP PHASE1:Hg19::chr1:151028802..151028816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56882 | |EntrezGene=56882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=17719 | |HGNC=17719 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRR8 | |UniProt=Q9NRR8 | ||
|association_with_transcript=-418bp_to_BC012796_5end | |association_with_transcript=-418bp_to_BC012796_5end | ||
|cluster_id=chr1:151028802..151028816,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_CDC42SE1_5end | |description=CAGE_peak_2_at_CDC42SE1_5end | ||
|id=chr1:151028802..151028816,- | |id=chr1:151028802..151028816,- | ||
|ontology_enrichment_celltype=CL:0000738!2.31e-39!140;CL:0000037!6.34e-34!172;CL:0000566!6.34e-34!172;CL:0002032!1.49e-31!165;CL:0000837!1.49e-31!165;CL:0000988!1.17e-30!182;CL:0000838!1.06e-29!52;CL:0002087!3.40e-29!119;CL:0002031!5.41e-29!124;CL:0000542!6.81e-29!53;CL:0000051!6.81e-29!53;CL:0000791!1.30e-25!18;CL:0000789!1.30e-25!18;CL:0002420!1.30e-25!18;CL:0002419!1.30e-25!18;CL:0000790!1.30e-25!18;CL:0000084!2.53e-22!25;CL:0000827!2.53e-22!25;CL:0000625!1.39e-16!11;CL:0000236!1.80e-11!14;CL:0000624!1.19e-09!6;CL:0000763!5.40e-09!112;CL:0000049!5.40e-09!112;CL:0000766!2.08e-08!76;CL:0000094!2.80e-08!8;CL:0000945!2.34e-07!24;CL:0000826!2.34e-07!24 | |ontology_enrichment_celltype=CL:0000738!2.31e-39!140;CL:0000037!6.34e-34!172;CL:0000566!6.34e-34!172;CL:0002032!1.49e-31!165;CL:0000837!1.49e-31!165;CL:0000988!1.17e-30!182;CL:0000838!1.06e-29!52;CL:0002087!3.40e-29!119;CL:0002031!5.41e-29!124;CL:0000542!6.81e-29!53;CL:0000051!6.81e-29!53;CL:0000791!1.30e-25!18;CL:0000789!1.30e-25!18;CL:0002420!1.30e-25!18;CL:0002419!1.30e-25!18;CL:0000790!1.30e-25!18;CL:0000084!2.53e-22!25;CL:0000827!2.53e-22!25;CL:0000625!1.39e-16!11;CL:0000236!1.80e-11!14;CL:0000624!1.19e-09!6;CL:0000763!5.40e-09!112;CL:0000049!5.40e-09!112;CL:0000766!2.08e-08!76;CL:0000094!2.80e-08!8;CL:0000945!2.34e-07!24;CL:0000826!2.34e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.59e-43;18!CL:0000789;9.59e-43;18!CL:0002419;9.59e-43;18!CL:0000084;1.15e-32;25!CL:0000625;3.41e-27;11!CL:0000542;4.55e-26;53!CL:0000236;3.97e-21;13!CL:0000624;2.22e-15;6!CL:0000094;2.63e-13;8!CL:0000945;2.84e-10;24!CL:0000081;2.14e-09;11!CL:0000898;5.80e-09;3!CL:0002087;1.18e-08;104!CL:0000226;6.25e-08;3!CL:0000842;6.25e-08;3!CL:0000623;9.76e-08;3!CL:0000767;1.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.07e-44,52;CL:0000542,3.22e-43,53;CL:0000051,3.22e-43,53;CL:0000791,1.01e-42,18;CL:0000789,1.01e-42,18;CL:0002420,1.01e-42,18;CL:0002419,1.01e-42,18;CL:0000790,1.01e-42,18;CL:0000084,1.22e-32,25;CL:0000827,1.22e-32,25;CL:0000738,4.36e-30,136;CL:0000625,3.16e-27,11;CL:0002087,1.85e-23,115;CL:0000037,4.50e-23,168;CL:0000988,3.05e-21,177;CL:0002032,7.01e-21,161;CL:0000837,7.01e-21,161;CL:0002031,1.71e-20,120;CL:0000236,2.30e-19,14;CL:0000624,2.28e-15,6;CL:0000094,2.38e-13,8;CL:0000945,3.08e-10,24;CL:0000826,3.08e-10,24;CL:0000081,1.99e-09,11;CL:0000898,5.66e-09,3;CL:0000226,5.89e-08,3;CL:0000842,5.89e-08,3;CL:0000623,9.31e-08,3;CL:0000825,9.31e-08,3;CL:0000767,1.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.59e-43;18!CL:0000051;4.55e-26;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-13!102;UBERON:0003061!1.05e-13!102;UBERON:0002193!5.35e-13!112;UBERON:0000178!6.22e-13!15;UBERON:0000179!6.22e-13!15;UBERON:0000463!6.22e-13!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.53e-22;15!UBERON:0000179;7.53e-22;15!UBERON:0000463;7.53e-22;15!UBERON:0002390;1.08e-09;32!UBERON:0002193;1.55e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.78e-22,15;UBERON:0000179,6.78e-22,15;UBERON:0000463,6.78e-22,15 | |||
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| ||
|short_description=p2@CDC42SE1 | |short_description=p2@CDC42SE1 | ||
}} | }} |
Latest revision as of 23:55, 16 September 2015
Short description: | p2@CDC42SE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42SE1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -418bp_to_BC012796_5end |
EntrezGene: | CDC42SE1 |
HGNC: | 17719 |
UniProt: | Q9NRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.07e-44 | 52 |
lymphocyte | 3.22e-43 | 53 |
common lymphoid progenitor | 3.22e-43 | 53 |
mature alpha-beta T cell | 1.01e-42 | 18 |
alpha-beta T cell | 1.01e-42 | 18 |
immature T cell | 1.01e-42 | 18 |
mature T cell | 1.01e-42 | 18 |
immature alpha-beta T cell | 1.01e-42 | 18 |
T cell | 1.22e-32 | 25 |
pro-T cell | 1.22e-32 | 25 |
leukocyte | 4.36e-30 | 136 |
CD8-positive, alpha-beta T cell | 3.16e-27 | 11 |
nongranular leukocyte | 1.85e-23 | 115 |
hematopoietic stem cell | 4.50e-23 | 168 |
hematopoietic cell | 3.05e-21 | 177 |
hematopoietic oligopotent progenitor cell | 7.01e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.01e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.71e-20 | 120 |
B cell | 2.30e-19 | 14 |
CD4-positive, alpha-beta T cell | 2.28e-15 | 6 |
granulocyte | 2.38e-13 | 8 |
lymphocyte of B lineage | 3.08e-10 | 24 |
pro-B cell | 3.08e-10 | 24 |
blood cell | 1.99e-09 | 11 |
naive T cell | 5.66e-09 | 3 |
single nucleate cell | 5.89e-08 | 3 |
mononuclear cell | 5.89e-08 | 3 |
natural killer cell | 9.31e-08 | 3 |
pro-NK cell | 9.31e-08 | 3 |
basophil | 1.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.78e-22 | 15 |
haemolymphatic fluid | 6.78e-22 | 15 |
organism substance | 6.78e-22 | 15 |