FFCP PHASE1:Hg19::chr1:152975488..152975498,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6707 | |EntrezGene=6707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11268 | |HGNC=11268 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ12 | |UniProt=F5GZ12 | ||
|association_with_transcript=0bp_to_ENST00000542696_5end | |association_with_transcript=0bp_to_ENST00000542696_5end | ||
|cluster_id=chr1:152975488..152975498,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_4_at_SPRR3_5end | |description=CAGE_peak_4_at_SPRR3_5end | ||
|id=chr1:152975488..152975498,+ | |id=chr1:152975488..152975498,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.62e-41;1!UBERON:0008814;4.66e-21;2!UBERON:0010056;4.66e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.63e-25!2;UBERON:0001723!5.99e-18!3;UBERON:0001033!5.99e-18!3;UBERON:0010056!5.99e-18!3;UBERON:0002372!5.15e-14!1;UBERON:0001961!5.15e-14!1;UBERON:0001744!5.15e-14!1;UBERON:0001735!5.15e-14!1;UBERON:0005418!6.65e-14!1;UBERON:0001389!6.65e-14!1;UBERON:0000026!6.65e-14!1;UBERON:0008784!6.65e-14!1;UBERON:0006058!6.65e-14!1;UBERON:0003663!6.65e-14!1;UBERON:0001383!6.65e-14!1;UBERON:0004256!6.65e-14!1;UBERON:0002529!6.65e-14!1;UBERON:0004708!6.65e-14!1;UBERON:0002101!6.65e-14!1;UBERON:0004709!6.65e-14!1;UBERON:0003661!6.65e-14!1;UBERON:0002471!6.65e-14!1;UBERON:0004357!6.65e-14!1;UBERON:0009872!6.65e-14!1;UBERON:0004347!6.65e-14!1;UBERON:0005420!6.65e-14!1;UBERON:0005732!6.65e-14!1;UBERON:0006057!6.65e-14!1;UBERON:0000978!6.65e-14!1;UBERON:0002103!6.65e-14!1;UBERON:0001665!6.65e-14!1;UBERON:0003823!6.65e-14!1;UBERON:0000154!6.65e-14!1;UBERON:0005733!6.65e-14!1;UBERON:0005730!6.65e-14!1;UBERON:0001042!4.82e-12!10;UBERON:0009145!4.82e-12!10;UBERON:0006562!5.33e-11!11;UBERON:0000065!3.79e-08!53;UBERON:0003126!5.66e-08!7;UBERON:0001005!5.66e-08!7;UBERON:0000341!9.87e-08!2;UBERON:0001630!1.36e-07!2;UBERON:0005090!1.36e-07!2;UBERON:0000078!6.41e-07!18;UBERON:0000072!9.36e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.75e-53;3!UBERON:0001033;3.75e-53;3!UBERON:0002372;3.30e-40;1!UBERON:0001961;3.30e-40;1!UBERON:0001744;3.30e-40;1!UBERON:0001042;3.30e-40;1!UBERON:0001735;3.30e-40;1!UBERON:0000341;3.81e-21;2!UBERON:0006562;6.96e-21;2!UBERON:0001043;1.22e-14;3!UBERON:0000165;1.74e-13;28!UBERON:0000974;5.92e-08;6!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24!UBERON:0000153;2.01e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.75e-53,3;UBERON:0001033,3.75e-53,3;UBERON:0010056,3.75e-53,3;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0001042,4.93e-36,10;UBERON:0009145,4.93e-36,10;UBERON:0006562,7.42e-33,11;UBERON:0000341,3.81e-21,2;UBERON:0001557,1.91e-19,19;UBERON:0000166,6.38e-17,22;UBERON:0001043,1.22e-14,3;UBERON:0009143,1.22e-14,3;UBERON:0000165,4.73e-13,29;UBERON:0000930,4.73e-13,29;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0000161,1.12e-10,36;UBERON:0008814,8.11e-10,18;UBERON:0000072,2.33e-08,47;UBERON:0001444,4.76e-08,49;UBERON:0001041,6.09e-08,87;UBERON:0000020,1.31e-07,24;UBERON:0001032,1.31e-07,24;UBERON:0004456,1.31e-07,24;UBERON:0000065,2.27e-07,54;UBERON:0000033,3.92e-07,56 | |||
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|short_description=p4@SPRR3 | |short_description=p4@SPRR3 | ||
}} | }} |
Latest revision as of 04:09, 17 September 2015
Short description: | p4@SPRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPRR3_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000542696_5end |
EntrezGene: | SPRR3 |
HGNC: | 11268 |
UniProt: | F5GZ12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.75e-53 | 3 |
gustatory system | 3.75e-53 | 3 |
future tongue | 3.75e-53 | 3 |
tonsil | 3.30e-40 | 1 |
mucosa-associated lymphoid tissue | 3.30e-40 | 1 |
lymphoid tissue | 3.30e-40 | 1 |
tonsillar ring | 3.30e-40 | 1 |
chordate pharynx | 4.93e-36 | 10 |
pharyngeal region of foregut | 4.93e-36 | 10 |
pharynx | 7.42e-33 | 11 |
throat | 3.81e-21 | 2 |
upper respiratory tract | 1.91e-19 | 19 |
oral opening | 6.38e-17 | 22 |
esophagus | 1.22e-14 | 3 |
esophageal region | 1.22e-14 | 3 |
mouth | 4.73e-13 | 29 |
stomodeum | 4.73e-13 | 29 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
orifice | 1.12e-10 | 36 |
pharyngeal arch system | 8.11e-10 | 18 |
segment of respiratory tract | 2.33e-08 | 47 |
subdivision of head | 4.76e-08 | 49 |
foregut | 6.09e-08 | 87 |
sense organ | 1.31e-07 | 24 |
sensory system | 1.31e-07 | 24 |
entire sense organ system | 1.31e-07 | 24 |
respiratory tract | 2.27e-07 | 54 |
head | 3.92e-07 | 56 |