FFCP PHASE1:Hg19::chr14:99721739..99721742,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:99721739..99721742,- | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr14:99721739..99721742,- | |description=CAGE_peak_at_chr14:99721739..99721742,- | ||
|id=chr14:99721739..99721742,- | |id=chr14:99721739..99721742,- | ||
|ontology_enrichment_celltype=CL:0000084!3.60e-21!25;CL:0000827!3.60e-21!25;CL:0000791!2.24e-17!18;CL:0000789!2.24e-17!18;CL:0002420!2.24e-17!18;CL:0002419!2.24e-17!18;CL:0000790!2.24e-17!18;CL:0000625!2.97e-11!11;CL:0000838!5.26e-11!52;CL:0000542!1.43e-10!53;CL:0000051!1.43e-10!53;CL:0000738!4.98e-08!140;CL:0002087!2.32e-07!119;CL:0000624!5.04e-07!6 | |ontology_enrichment_celltype=CL:0000084!3.60e-21!25;CL:0000827!3.60e-21!25;CL:0000791!2.24e-17!18;CL:0000789!2.24e-17!18;CL:0002420!2.24e-17!18;CL:0002419!2.24e-17!18;CL:0000790!2.24e-17!18;CL:0000625!2.97e-11!11;CL:0000838!5.26e-11!52;CL:0000542!1.43e-10!53;CL:0000051!1.43e-10!53;CL:0000738!4.98e-08!140;CL:0002087!2.32e-07!119;CL:0000624!5.04e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.62e-34;18!CL:0000789;3.62e-34;18!CL:0002419;3.62e-34;18!CL:0000084;1.59e-31;25!CL:0000625;1.74e-21;11!CL:0000624;7.77e-13;6!CL:0000542;1.34e-08;53!CL:0000623;3.74e-07;3!CL:0000226;4.27e-07;3!CL:0000842;4.27e-07;3!CL:0000898;8.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.57e-34,18;CL:0000789,3.57e-34,18;CL:0002420,3.57e-34,18;CL:0002419,3.57e-34,18;CL:0000790,3.57e-34,18;CL:0000084,1.44e-31,25;CL:0000827,1.44e-31,25;CL:0000625,1.64e-21,11;CL:0000838,2.19e-16,52;CL:0000542,6.12e-16,53;CL:0000051,6.12e-16,53;CL:0000624,8.13e-13,6;CL:0000738,1.14e-08,136;CL:0002087,4.49e-08,115;CL:0000623,3.61e-07,3;CL:0000825,3.61e-07,3;CL:0000226,4.23e-07,3;CL:0000842,4.23e-07,3;CL:0000898,8.98e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.62e-34;18!CL:0000051;1.34e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.45e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.70e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-17!115;UBERON:0000178!4.72e-12!15;UBERON:0000179!4.72e-12!15;UBERON:0000463!4.72e-12!15;UBERON:0001869!6.52e-11!32;UBERON:0001893!1.69e-10!34;UBERON:0002791!4.37e-10!33;UBERON:0002020!1.20e-09!34;UBERON:0003528!1.20e-09!34;UBERON:0002619!2.85e-09!22;UBERON:0002780!5.07e-09!41;UBERON:0001890!5.07e-09!41;UBERON:0006240!5.07e-09!41;UBERON:0003080!1.35e-08!42;UBERON:0000956!3.46e-08!25;UBERON:0000203!3.46e-08!25;UBERON:0001950!4.58e-08!20;UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.19e-17!115;UBERON:0000178!4.72e-12!15;UBERON:0000179!4.72e-12!15;UBERON:0000463!4.72e-12!15;UBERON:0001869!6.52e-11!32;UBERON:0001893!1.69e-10!34;UBERON:0002791!4.37e-10!33;UBERON:0002020!1.20e-09!34;UBERON:0003528!1.20e-09!34;UBERON:0002619!2.85e-09!22;UBERON:0002780!5.07e-09!41;UBERON:0001890!5.07e-09!41;UBERON:0006240!5.07e-09!41;UBERON:0003080!1.35e-08!42;UBERON:0000956!3.46e-08!25;UBERON:0000203!3.46e-08!25;UBERON:0001950!4.58e-08!20;UBERON:0001049!3.85e-07!57;UBERON:0005068!3.85e-07!57;UBERON:0006241!3.85e-07!57;UBERON:0007135!3.85e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-16;15!UBERON:0000179;1.10e-16;15!UBERON:0000463;1.10e-16;15!UBERON:0002390;2.85e-09;32!UBERON:0002346;1.22e-08;4!UBERON:0000923;1.22e-08;4!UBERON:0010316;1.22e-08;4!UBERON:0005291;1.22e-08;4!UBERON:0002050;7.08e-07;5!UBERON:0005423;7.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.03e-16,15;UBERON:0000179,1.03e-16,15;UBERON:0000463,1.03e-16,15;UBERON:0002370,7.64e-08,4;UBERON:0005058,7.64e-08,4;UBERON:0009113,7.64e-08,4;UBERON:0003295,7.64e-08,4;UBERON:0005562,7.64e-08,4 | |||
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| ||
|short_description=p@chr14:99721739..99721742,- | |short_description=p@chr14:99721739..99721742,- | ||
}} | }} |
Latest revision as of 00:11, 25 July 2015
Short description: | p@chr14:99721739..99721742, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:99721739..99721742, - |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.57e-34 | 18 |
alpha-beta T cell | 3.57e-34 | 18 |
immature T cell | 3.57e-34 | 18 |
mature T cell | 3.57e-34 | 18 |
immature alpha-beta T cell | 3.57e-34 | 18 |
T cell | 1.44e-31 | 25 |
pro-T cell | 1.44e-31 | 25 |
CD8-positive, alpha-beta T cell | 1.64e-21 | 11 |
lymphoid lineage restricted progenitor cell | 2.19e-16 | 52 |
lymphocyte | 6.12e-16 | 53 |
common lymphoid progenitor | 6.12e-16 | 53 |
CD4-positive, alpha-beta T cell | 8.13e-13 | 6 |
leukocyte | 1.14e-08 | 136 |
nongranular leukocyte | 4.49e-08 | 115 |
natural killer cell | 3.61e-07 | 3 |
pro-NK cell | 3.61e-07 | 3 |
single nucleate cell | 4.23e-07 | 3 |
mononuclear cell | 4.23e-07 | 3 |
naive T cell | 8.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.03e-16 | 15 |
haemolymphatic fluid | 1.03e-16 | 15 |
organism substance | 1.03e-16 | 15 |
thymus | 7.64e-08 | 4 |
hemolymphoid system gland | 7.64e-08 | 4 |
thymic region | 7.64e-08 | 4 |
pharyngeal gland | 7.64e-08 | 4 |
thymus primordium | 7.64e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.70e-08 | 10 |