FFCP PHASE1:Hg19::chr11:35251132..35251143,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:35251132..35251143,+
|short_description=p17@CD44
|description=CAGE_peak_17_at_CD44_5end
|association_with_transcript=-395bp_to_AK127622_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=960 | |EntrezGene=960 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |HGNC=1681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-395bp_to_AK127622_5end | |||
|cluster_id=chr11:35251132..35251143,+ | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_17_at_CD44_5end | |||
|id=chr11:35251132..35251143,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.99e-20!42;CL:0000860!2.17e-18!45;CL:0000557!2.11e-16!71;CL:0000839!4.69e-16!70;CL:0000766!2.63e-15!76;CL:0002194!9.75e-15!63;CL:0000576!9.75e-15!63;CL:0000040!9.75e-15!63;CL:0000559!9.75e-15!63;CL:0002009!1.92e-14!65;CL:0000723!3.43e-11!436;CL:0000048!7.26e-11!430;CL:0002371!1.66e-10!591;CL:0000144!4.07e-10!625;CL:0000134!4.32e-10!358;CL:0000003!6.33e-10!722;CL:0002320!6.42e-10!365;CL:0000219!1.20e-09!390;CL:0000034!1.27e-09!444;CL:0002031!2.48e-09!124;CL:0000548!1.45e-08!679;CL:0000004!1.45e-08!679;CL:0000255!1.45e-08!679;CL:0002087!3.15e-08!119;CL:0000012!5.08e-08!682;CL:0000738!5.42e-08!140;CL:0000763!5.86e-08!112;CL:0000049!5.86e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.82e-32;33!CL:0002057;4.82e-32;33!CL:0000473;1.76e-22;39!CL:0000234;1.76e-22;39!CL:0000576;4.53e-15;48!CL:0000766;1.06e-10;69!CL:0000097;6.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.40e-26,42;CL:0002057,1.40e-26,42;CL:0000473,3.78e-23,48;CL:0000234,3.78e-23,48;CL:0000557,7.96e-22,67;CL:0000839,3.02e-21,66;CL:0000766,3.06e-19,72;CL:0002009,4.00e-18,61;CL:0002194,4.49e-18,59;CL:0000576,4.49e-18,59;CL:0000040,4.49e-18,59;CL:0000559,4.49e-18,59;CL:0000219,1.25e-11,386;CL:0000134,5.20e-11,354;CL:0002320,1.22e-10,361;CL:0000723,2.28e-10,433;CL:0000763,3.38e-10,108;CL:0000049,3.38e-10,108;CL:0000048,3.72e-10,427;CL:0000034,1.34e-09,441;CL:0002031,4.32e-09,120;CL:0000738,5.48e-07,136;CL:0000097,7.60e-07,5;CL:0002028,7.60e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.98e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.62e-14!80;UBERON:0002204!2.29e-12!167;UBERON:0001474!5.56e-12!86;UBERON:0002390!6.05e-12!102;UBERON:0003061!6.05e-12!102;UBERON:0004765!6.23e-12!101;UBERON:0001434!6.23e-12!101;UBERON:0002384!1.55e-09!375;UBERON:0002193!2.09e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.75e-19,76;UBERON:0001474,2.13e-16,82;UBERON:0004765,3.36e-16,90;UBERON:0001434,8.87e-15,100;UBERON:0002390,1.02e-13,98;UBERON:0003061,1.02e-13,98;UBERON:0002405,1.64e-13,93;UBERON:0002204,8.32e-12,167;UBERON:0002193,3.77e-11,108;UBERON:0002384,4.93e-10,371 | |||
|phase1_expression=0.908391896352783,1.07050261945492,1.12763523276777,0,0,0,0,0.631719873426831,1.04474251279935,0.737201809504527,0,0,0,0.74259811776028,0,2.01697543935533,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0,0,1.43117993565528,1.23186982565596,0.87879847716362,0.305653622991805,0.246301768349837,0.0787107813136792,1.18009283054671,0.383829398097213,0,0,0,0.739508020333575,0,0,0,0.553995408531877,0.401088894940283,0.868043482863407,1.11957737119962,0.971680998056939,0,5.67053131240302,2.64513160582167,2.91100873425379,3.95129362739664,1.23350366406548,2.47765096716083,2.3015391385772,2.30544635876191,3.31075121844019,3.44745680736619,4.51839278508678,1.35426486594342,6.96496656307637,6.00393530127261,3.59557575112135,6.73384563215986,4.49300637906531,5.75403413219137,1.9791078011203,5.18605509816243,2.55734850319616,6.09439401120026,3.40431134814684,5.60540024096017,3.76872997885115,3.65038042894141,4.34377689410233,4.84319602106695,3.68277635987565,3.79754864929061,0.845021145247767,0.425208599930087,0.628975936525128,1.12328631146495,1.20141514273205,2.4108838004562,0.570025487482497,1.79025009479181,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.786839080455332,1.57204305099666,0.411202997999018,0.668745981562712,0.32592226663359,0,1.94826728407911,2.22820913770347,1.76763544484902,1.10766947291811,1.08321545506006,0.768547918354051,0.780356085359269,0.986627427622057,0.276350017785848,1.44901542867526,0.444859689486181,0.535081656179426,2.09071047609954,0.793165398882963,1.14966148080576,0.34362744548263,1.26509846009751,0.637130828648193,0,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0.80642697289893,1.60464117470104,0,0,0,0.12786256184353,2.89151321907653,1.50401373190767,2.462390822334,2.3858578411533,1.94653948121054,0,0,0.087834785693126,0,0,0,0.649094787309367,0.696518949197069,1.59549552622638,0.715471872916026,0,0.371457501329565,0,0,0,0,0.419499436209906,1.10047216776027,0,0,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,1.62028389576352,0,0,0,0,0,0,0,0,0,1.98788780678127,1.51956613997496,0.662045904066094,1.14734648299525,0.709336764396714,0,0,0.74000264525148,0.311211035399766,0.269421344139376,0,0.151357427644931,0.576175924479999,0,0.936480230490962,0,0.149448680551801,0.587172493218824,0.809364721840658,0.140450806702248,0.816616685019573,0.245668634623536,1.03325781175765,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0.30648779579902,0.300476117813194,0.226864366320042,1.4351170855109,0.213557388818567,0.635795703478686,3.60109315301283,2.37020817248409,0,1.48893485065272,7.59493495085698,1.55899208257918,0,1.65689817556139,3.71785930683267,2.84007674013291,1.41052937518696,1.01736355386293,1.35282597214308,3.00020732649918,1.14721838155602,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0.721879481669586,0.473227200159376,0,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,1.86575485194663,1.1240175325762,0.402115889646523,0.925884451585296,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0.492434012174795,1.8720341211139,0.148631162288728,1.87467667973554,1.51183915378974,0.708875486211932,0.626909658919938,0.581267877027924,0.383382679165211,5.41929561685538,1.32072651019839,4.35389042635621,4.90007841617669,5.0496973370552,1.07946420296687,0.763976851116555,1.17217447210047,0,1.33675740514321,1.8020583470635,2.28661146104463,0.224262168690721,0,0.36669142910475,1.29271715757778,3.57656445851882,0.845302752556,2.39344304926383,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0,0,0.65147236858747,0,0.791951872933429,3.01439377059586,0.871533458600294,2.99918973546171,0,0.502257091432126,0,0,0,0,0.579125226670317,1.02738161275192,0.358121926479791,0.448340575974109,0.197030760201927,0.646882724578552,0.256686072559497,1.27047312111232,0,0,0.167516265334349,1.27587750330633,0.749007023947182,0,0.414415513436035,1.2269149171914,0.500170521059677,0,2.07970861530807,3.39015078714607,1.41932173530541,0.234282829985426,0,0,1.03473071292505,0,0,2.25897397617015,0.195801157462741,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,1.73675465473144,1.07423381301644,1.96462066103151,0.384417447767103,0.511707249066704,2.0911009748669,0,1.69630663182921,1.42049380250502,1.47828880824856,2.59627214591811,1.85936605535935,0.120859449591622,4.0101294060657,0.184161977871793,2.87036120411517,2.00300284807389,2.49136388422906,0,0.539107359730903,0,0,0.633309773357254,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0.650060246036521,1.6068392984416,0.96670718292122,0.154048617114644,0.307007349452259,0.413509717453592,0.322260734604821,0,0.255679882248303,0.267096106940212,1.65284915360978,0.192190067365106,0.510450849978337,0.30347334256665,1.39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| ||
|short_description=p17@CD44 | |||
}} | }} |
Latest revision as of 19:40, 17 September 2015
Short description: | p17@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | -395bp_to_AK127622_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.40e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.40e-26 | 42 |
defensive cell | 3.78e-23 | 48 |
phagocyte | 3.78e-23 | 48 |
granulocyte monocyte progenitor cell | 7.96e-22 | 67 |
myeloid lineage restricted progenitor cell | 3.02e-21 | 66 |
myeloid leukocyte | 3.06e-19 | 72 |
macrophage dendritic cell progenitor | 4.00e-18 | 61 |
monopoietic cell | 4.49e-18 | 59 |
monocyte | 4.49e-18 | 59 |
monoblast | 4.49e-18 | 59 |
promonocyte | 4.49e-18 | 59 |
motile cell | 1.25e-11 | 386 |
mesenchymal cell | 5.20e-11 | 354 |
connective tissue cell | 1.22e-10 | 361 |
somatic stem cell | 2.28e-10 | 433 |
myeloid cell | 3.38e-10 | 108 |
common myeloid progenitor | 3.38e-10 | 108 |
multi fate stem cell | 3.72e-10 | 427 |
stem cell | 1.34e-09 | 441 |
hematopoietic lineage restricted progenitor cell | 4.32e-09 | 120 |
leukocyte | 5.48e-07 | 136 |
mast cell | 7.60e-07 | 5 |
basophil mast progenitor cell | 7.60e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.75e-19 | 76 |
bone element | 2.13e-16 | 82 |
skeletal element | 3.36e-16 | 90 |
skeletal system | 8.87e-15 | 100 |
hematopoietic system | 1.02e-13 | 98 |
blood island | 1.02e-13 | 98 |
immune system | 1.64e-13 | 93 |
musculoskeletal system | 8.32e-12 | 167 |
hemolymphoid system | 3.77e-11 | 108 |
connective tissue | 4.93e-10 | 371 |