FFCP PHASE1:Hg19::chr15:83953474..83953483,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=646 | |EntrezGene=646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1081 | |HGNC=1081 | ||
|TSSclassifier=strong | |||
|UniProt=Q01954 | |UniProt=Q01954 | ||
|association_with_transcript=-6bp_to_NM_001717,uc002bjt.1_5end | |association_with_transcript=-6bp_to_NM_001717,uc002bjt.1_5end | ||
|cluster_id=chr15:83953474..83953483,- | |||
|coexpression_cluster_id=C2351 | |||
|description=CAGE_peak_3_at_BNC1_5end | |description=CAGE_peak_3_at_BNC1_5end | ||
|id=chr15:83953474..83953483,- | |id=chr15:83953474..83953483,- | ||
|ontology_enrichment_celltype=CL:0000220!3.99e-18!246;CL:0000076!7.21e-18!62;CL:0002321!1.05e-17!248;CL:0000222!1.56e-13!119;CL:0000066!4.17e-13!254;CL:0000548!1.65e-08!679;CL:0000004!1.65e-08!679;CL:0000255!1.65e-08!679;CL:0000055!2.19e-08!180;CL:0002076!2.83e-08!43;CL:0000012!3.19e-08!682;CL:0000144!4.73e-08!625;CL:0002159!1.18e-07!13;CL:1000449!3.90e-07!16;CL:0002681!6.29e-07!13;CL:0002584!6.29e-07!13;CL:0000213!6.63e-07!57;CL:0000215!6.63e-07!57;CL:0000077!9.40e-07!19 | |ontology_enrichment_celltype=CL:0000220!3.99e-18!246;CL:0000076!7.21e-18!62;CL:0002321!1.05e-17!248;CL:0000222!1.56e-13!119;CL:0000066!4.17e-13!254;CL:0000548!1.65e-08!679;CL:0000004!1.65e-08!679;CL:0000255!1.65e-08!679;CL:0000055!2.19e-08!180;CL:0002076!2.83e-08!43;CL:0000012!3.19e-08!682;CL:0000144!4.73e-08!625;CL:0002159!1.18e-07!13;CL:1000449!3.90e-07!16;CL:0002681!6.29e-07!13;CL:0002584!6.29e-07!13;CL:0000213!6.63e-07!57;CL:0000215!6.63e-07!57;CL:0000077!9.40e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000622;6.83e-18;5!CL:0002076;5.53e-16;42!CL:0002159;9.71e-16;14!CL:0000154;7.28e-15;6!CL:0000150;8.46e-14;9!CL:0002621;4.36e-12;3!CL:0002166;1.59e-11;3!CL:0002623;4.02e-11;3!CL:0002251;2.86e-10;20!CL:0002368;7.03e-10;13!CL:0000317;1.72e-08;2!CL:1000448;1.72e-08;2!CL:0002308;1.72e-08;2!CL:0002140;1.72e-08;2!CL:0000362;5.70e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.42e-18,42;CL:0000622,2.90e-18,5;CL:0000066,1.08e-17,253;CL:0002159,4.09e-16,14;CL:0000154,3.59e-15,6;CL:0000223,4.15e-14,58;CL:0000150,5.80e-14,9;CL:0002621,3.29e-12,3;CL:0002166,7.13e-12,3;CL:0002321,1.09e-11,250;CL:0002623,3.60e-11,3;CL:0000076,5.47e-11,63;CL:0002251,2.45e-10,20;CL:0002368,6.36e-10,13;CL:0000317,7.92e-09,2;CL:1000448,7.92e-09,2;CL:0002308,7.92e-09,2;CL:0002140,7.92e-09,2;CL:0002077,2.90e-07,34;CL:0000362,4.33e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.26e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.29e-12!95;UBERON:0005256!2.86e-11!143;UBERON:0000119!5.35e-10!312;UBERON:0000483!9.18e-10!309;UBERON:0000486!2.29e-09!82;UBERON:0000165!1.32e-08!28;UBERON:0000930!1.32e-08!28;UBERON:0000475!1.74e-08!365;UBERON:0000914!4.04e-08!83;UBERON:0002329!4.04e-08!83;UBERON:0003077!4.04e-08!83;UBERON:0003059!4.04e-08!83;UBERON:0007282!4.04e-08!83;UBERON:0009618!4.04e-08!83;UBERON:0007285!4.04e-08!83;UBERON:0001444!1.00e-07!48;UBERON:0000166!1.05e-07!21;UBERON:0001851!1.13e-07!16;UBERON:0006555!1.25e-07!17;UBERON:0005103!1.25e-07!17;UBERON:0000083!1.25e-07!17;UBERON:0009201!1.25e-07!17;UBERON:0004819!1.25e-07!17;UBERON:0006553!1.25e-07!17;UBERON:0003074!1.25e-07!17;UBERON:0003060!1.25e-07!17;UBERON:0000161!1.47e-07!35;UBERON:0004211!3.90e-07!16;UBERON:0001285!3.90e-07!16;UBERON:0007684!3.90e-07!16;UBERON:0003220!3.90e-07!16;UBERON:0004208!3.90e-07!16;UBERON:0000080!5.58e-07!18;UBERON:0002120!5.58e-07!18;UBERON:0004875!5.58e-07!18;UBERON:0005721!5.58e-07!18;UBERON:0005754!5.58e-07!18;UBERON:0007297!5.58e-07!18;UBERON:0001225!6.29e-07!13;UBERON:0008987!6.29e-07!13;UBERON:0003064!7.52e-07!37;UBERON:0000353!7.54e-07!17;UBERON:0002100!7.75e-07!216;UBERON:0000490!7.96e-07!138 | |ontology_enrichment_uberon=UBERON:0003102!2.29e-12!95;UBERON:0005256!2.86e-11!143;UBERON:0000119!5.35e-10!312;UBERON:0000483!9.18e-10!309;UBERON:0000486!2.29e-09!82;UBERON:0000165!1.32e-08!28;UBERON:0000930!1.32e-08!28;UBERON:0000475!1.74e-08!365;UBERON:0000914!4.04e-08!83;UBERON:0002329!4.04e-08!83;UBERON:0003077!4.04e-08!83;UBERON:0003059!4.04e-08!83;UBERON:0007282!4.04e-08!83;UBERON:0009618!4.04e-08!83;UBERON:0007285!4.04e-08!83;UBERON:0001444!1.00e-07!48;UBERON:0000166!1.05e-07!21;UBERON:0001851!1.13e-07!16;UBERON:0006555!1.25e-07!17;UBERON:0005103!1.25e-07!17;UBERON:0000083!1.25e-07!17;UBERON:0009201!1.25e-07!17;UBERON:0004819!1.25e-07!17;UBERON:0006553!1.25e-07!17;UBERON:0003074!1.25e-07!17;UBERON:0003060!1.25e-07!17;UBERON:0000161!1.47e-07!35;UBERON:0004211!3.90e-07!16;UBERON:0001285!3.90e-07!16;UBERON:0007684!3.90e-07!16;UBERON:0003220!3.90e-07!16;UBERON:0004208!3.90e-07!16;UBERON:0000080!5.58e-07!18;UBERON:0002120!5.58e-07!18;UBERON:0004875!5.58e-07!18;UBERON:0005721!5.58e-07!18;UBERON:0005754!5.58e-07!18;UBERON:0007297!5.58e-07!18;UBERON:0001225!6.29e-07!13;UBERON:0008987!6.29e-07!13;UBERON:0003064!7.52e-07!37;UBERON:0000353!7.54e-07!17;UBERON:0002100!7.75e-07!216;UBERON:0000490!7.96e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.36e-12;3!UBERON:0002365;1.78e-09;31!UBERON:0002330;1.78e-09;31!UBERON:0001708;9.51e-09;4!UBERON:0008895;9.51e-09;4!UBERON:0002419;1.72e-08;2!UBERON:0007771;1.72e-08;2!UBERON:0003297;1.72e-08;2!UBERON:0001821;1.72e-08;2!UBERON:0003487;1.72e-08;2!UBERON:0001820;1.72e-08;2!UBERON:0000161;2.05e-08;19!UBERON:0000166;2.05e-08;19!UBERON:0000486;1.92e-07;12!UBERON:0004807;2.15e-07;22!UBERON:0011159;4.49e-07;5!UBERON:0000165;5.84e-07;28!UBERON:0003729;7.63e-07;13!UBERON:0005911;8.11e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.29e-12,3;UBERON:0002530,4.35e-10,59;UBERON:0002365,1.44e-09,31;UBERON:0002330,1.44e-09,31;UBERON:0001708,5.25e-09,4;UBERON:0008895,5.25e-09,4;UBERON:0002419,7.92e-09,2;UBERON:0007771,7.92e-09,2;UBERON:0003297,7.92e-09,2;UBERON:0001821,7.92e-09,2;UBERON:0003487,7.92e-09,2;UBERON:0001820,7.92e-09,2;UBERON:0005089,7.92e-09,2;UBERON:0005088,7.92e-09,2;UBERON:0003102,1.01e-08,99;UBERON:0004119,7.47e-08,160;UBERON:0000925,7.47e-08,160;UBERON:0006595,7.47e-08,160;UBERON:0001004,1.20e-07,74;UBERON:0005911,1.39e-07,82;UBERON:0011159,2.81e-07,5;UBERON:0000166,4.18e-07,22;UBERON:0003729,6.85e-07,13;UBERON:0000033,8.85e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,2.75826367343678,3.0120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.261958150995425,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.626984899610432,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0.468642863667593,0,0,0.149448680551801,0.352303495931295,0.971237666208789,0.98315564691574,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0.875829639103749,0,0,0,0.600952235626387,0.340296549480063,0.717558542755448,0.213557388818567,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0.675105328965065,0.194874010322397,0,0,0.323292113637624,0,0.302256294682921,0.339121184620975,1.54608682530637,2.72746120590835,4.01526433544605,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,0.343135620597051,2.08525542276389,0,3.71957197923034,1.85176890317059,0.651616610620649,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,2.81201501960331,1.6798212819886,1.55952606966625,0.895585227028483,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.03417372606222,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,1.74306691720059,2.19940580600526,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.574890092096664,0.519254429183621,0.464841513839837,0,2.80709058424599,1.38121483403844,0,0.182091168006717,0.131124414959424,1.80479845162965,0.385076685522074,0.784349769176855,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0.270946437543853,0.501689773854853,0.764628819135115,0.831076008928724,1.34324852833307,0,0,0.769350375349168,0.656029291399411,0,0,0,0,3.44559322797703,1.95018073810956,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.214840489736547,0.435050081742686,0.340906509664404,0.0890320356467374,0.495854746082934,2.30628080838127,2.29702882490251,1.31505115112215,0,0,0,0,0.532306030317022,0.869932992075073,0,0.429374660225974,0,0.316379424718726,3.24071329670502,0,0,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0.404364963146632,0,1.26377536871694,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,1.14729081763241,0.294747123039363,0,0,0.211107635297664,0,0.75894634753143,0,1.82822014178473,0.670302275535787,0,0,0.86101074534246,1.68471475667626,0.886860307073351,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.910347586283997,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66587075604442,0.957651272384428,0.34945333648406,0.51595809741485,0,0,0,0.290967049465258,0,0,0.685209623233754,0.993573058514948,0,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,1.34173875039706,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0.318593534327405,0.899606224327209,0.776314784381297,0,0.53168342911599,0,0.601030435988874,0.380805212168795,0.406870733204662,0.181848659202559,2.47044281197723,0.928067519756987,0,0.400027764663154,0,0.673498977531838,0,0.770479321629213,1.28664954824955,0.782982875895635,0.453411851024545,0.231522474323834,0.244736704506468,0.179088841081487,0.308801447160972,1.09642024789354,0.883445729729405,1.73622634443823,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0.509197589862076,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.235939446695481,1.10057159113007,0.577628330751691,0,0,0,0,0.20170506870352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| ||
|short_description=p3@BNC1 | |short_description=p3@BNC1 | ||
}} | }} |
Latest revision as of 12:18, 19 September 2015
Short description: | p3@BNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BNC1_5end |
Coexpression cluster: | C2351_Small_Keratinocyte_Bronchial_Sebocyte_mesothelioma_salivary_Tracheal |
Association with transcript: | -6bp_to_NM_001717, uc002bjt.1_5end |
EntrezGene: | BNC1 |
HGNC: | 1081 |
UniProt: | Q01954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.42e-18 | 42 |
acinar cell | 2.90e-18 | 5 |
epithelial cell | 1.08e-17 | 253 |
general ecto-epithelial cell | 4.09e-16 | 14 |
protein secreting cell | 3.59e-15 | 6 |
endodermal cell | 4.15e-14 | 58 |
glandular epithelial cell | 5.80e-14 | 9 |
gingival epithelial cell | 3.29e-12 | 3 |
epithelial cell of Malassez | 7.13e-12 | 3 |
embryonic cell | 1.09e-11 | 250 |
acinar cell of salivary gland | 3.60e-11 | 3 |
squamous epithelial cell | 5.47e-11 | 63 |
epithelial cell of alimentary canal | 2.45e-10 | 20 |
respiratory epithelial cell | 6.36e-10 | 13 |
sebum secreting cell | 7.92e-09 | 2 |
epithelial cell of sweat gland | 7.92e-09 | 2 |
epithelial cell of skin gland | 7.92e-09 | 2 |
acinar cell of sebaceous gland | 7.92e-09 | 2 |
ecto-epithelial cell | 2.90e-07 | 34 |
epidermal cell | 4.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.29e-12 | 3 |
gland | 4.35e-10 | 59 |
exocrine gland | 1.44e-09 | 31 |
exocrine system | 1.44e-09 | 31 |
jaw skeleton | 5.25e-09 | 4 |
splanchnocranium | 5.25e-09 | 4 |
skin gland | 7.92e-09 | 2 |
epidermis gland | 7.92e-09 | 2 |
gland of integumental system | 7.92e-09 | 2 |
sebaceous gland | 7.92e-09 | 2 |
skin sebaceous gland | 7.92e-09 | 2 |
sweat gland | 7.92e-09 | 2 |
sweat gland placode | 7.92e-09 | 2 |
sebaceous gland placode | 7.92e-09 | 2 |
surface structure | 1.01e-08 | 99 |
endoderm-derived structure | 7.47e-08 | 160 |
endoderm | 7.47e-08 | 160 |
presumptive endoderm | 7.47e-08 | 160 |
respiratory system | 1.20e-07 | 74 |
endo-epithelium | 1.39e-07 | 82 |
primary subdivision of cranial skeletal system | 2.81e-07 | 5 |
oral opening | 4.18e-07 | 22 |
mouth mucosa | 6.85e-07 | 13 |
head | 8.85e-07 | 56 |