FFCP PHASE1:Hg19::chr20:35176544..35176572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:35176544..35176572,+ | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35176544..35176572,+ | |description=CAGE_peak_at_chr20:35176544..35176572,+ | ||
|id=chr20:35176544..35176572,+ | |id=chr20:35176544..35176572,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.58e-21!180;CL:0000057!3.69e-14!75;CL:0000192!2.28e-12!42;CL:0000514!2.28e-12!42;CL:0000680!4.29e-12!57;CL:0000056!4.29e-12!57;CL:0000355!4.29e-12!57;CL:0000183!5.70e-12!59;CL:0000187!2.20e-11!54;CL:0000393!4.97e-10!60;CL:0000211!4.97e-10!60;CL:0000359!7.43e-09!32;CL:0000222!2.23e-07!119 | |ontology_enrichment_celltype=CL:0000055!9.58e-21!180;CL:0000057!3.69e-14!75;CL:0000192!2.28e-12!42;CL:0000514!2.28e-12!42;CL:0000680!4.29e-12!57;CL:0000056!4.29e-12!57;CL:0000355!4.29e-12!57;CL:0000183!5.70e-12!59;CL:0000187!2.20e-11!54;CL:0000393!4.97e-10!60;CL:0000211!4.97e-10!60;CL:0000359!7.43e-09!32;CL:0000222!2.23e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.82e-09;43!CL:0000359;8.32e-08;32!CL:0000134;1.44e-07;55!CL:0002334;2.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.70e-13,43;CL:0000514,4.70e-13,43;CL:0000057,3.36e-11,76;CL:0000680,3.01e-10,58;CL:0000056,3.01e-10,58;CL:0000355,3.01e-10,58;CL:0000187,2.19e-09,55;CL:0000359,3.81e-08,32;CL:0000393,5.25e-08,61;CL:0000211,5.25e-08,61;CL:0002334,1.98e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.82e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.72e-16!143;UBERON:0000914!7.62e-15!83;UBERON:0002329!7.62e-15!83;UBERON:0003077!7.62e-15!83;UBERON:0003059!7.62e-15!83;UBERON:0007282!7.62e-15!83;UBERON:0009618!7.62e-15!83;UBERON:0007285!7.62e-15!83;UBERON:0002385!1.40e-13!63;UBERON:0001015!1.40e-13!63;UBERON:0000383!1.40e-13!63;UBERON:0004290!2.40e-13!70;UBERON:0001134!1.04e-12!61;UBERON:0002036!1.04e-12!61;UBERON:0003082!1.04e-12!61;UBERON:0002100!2.05e-11!216;UBERON:0000486!4.41e-11!82;UBERON:0000481!6.63e-11!347;UBERON:0003104!9.79e-11!238;UBERON:0009142!9.79e-11!238;UBERON:0001009!5.43e-10!113;UBERON:0000468!2.02e-09!659;UBERON:0004872!2.35e-09!84;UBERON:0004535!5.42e-09!110;UBERON:0007100!1.47e-08!27;UBERON:0003914!1.93e-08!118;UBERON:0000926!2.34e-08!448;UBERON:0004120!2.34e-08!448;UBERON:0006603!2.34e-08!448;UBERON:0002049!1.63e-07!79;UBERON:0007798!1.63e-07!79;UBERON:0001637!2.14e-07!42;UBERON:0003509!2.14e-07!42;UBERON:0004572!2.14e-07!42;UBERON:0000948!3.57e-07!24;UBERON:0005498!3.57e-07!24;UBERON:0004140!3.57e-07!24;UBERON:0009881!3.57e-07!24;UBERON:0004141!3.57e-07!24;UBERON:0003084!3.57e-07!24;UBERON:0007005!3.57e-07!24;UBERON:0004139!3.57e-07!24;UBERON:0004291!3.57e-07!24;UBERON:0003103!4.83e-07!69;UBERON:0001981!5.58e-07!60;UBERON:0007500!5.58e-07!60;UBERON:0004537!5.58e-07!60;UBERON:0006965!5.58e-07!60;UBERON:0000490!6.68e-07!138;UBERON:0000475!6.96e-07!365;UBERON:0000055!8.64e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.38e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.88e-11,160;UBERON:0009142,1.88e-11,160;UBERON:0002385,3.31e-11,64;UBERON:0001015,3.31e-11,64;UBERON:0000383,3.31e-11,64;UBERON:0005256,3.39e-11,122;UBERON:0007524,2.73e-10,73;UBERON:0001134,3.18e-10,62;UBERON:0002036,3.18e-10,62;UBERON:0003082,3.18e-10,62;UBERON:0002329,4.19e-10,71;UBERON:0003059,4.19e-10,71;UBERON:0007282,4.19e-10,71;UBERON:0004290,4.19e-10,71;UBERON:0009618,4.19e-10,71;UBERON:0007503,5.95e-10,78;UBERON:0003077,8.76e-10,72;UBERON:0007285,8.76e-10,72;UBERON:0000926,2.92e-09,315;UBERON:0004120,2.92e-09,315;UBERON:0006603,2.92e-09,315;UBERON:0002100,2.99e-08,199;UBERON:0000486,8.19e-08,83;UBERON:0007100,1.87e-07,27 | |||
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| ||
|short_description=p@chr20:35176544..35176572,+ | |short_description=p@chr20:35176544..35176572,+ | ||
}} | }} |
Latest revision as of 13:36, 28 July 2015
Short description: | p@chr20:35176544..35176572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35176544..35176572, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.70e-13 | 43 |
smooth muscle myoblast | 4.70e-13 | 43 |
fibroblast | 3.36e-11 | 76 |
muscle precursor cell | 3.01e-10 | 58 |
myoblast | 3.01e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-10 | 58 |
muscle cell | 2.19e-09 | 55 |
vascular associated smooth muscle cell | 3.81e-08 | 32 |
electrically responsive cell | 5.25e-08 | 61 |
electrically active cell | 5.25e-08 | 61 |
preadipocyte | 1.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.88e-11 | 160 |
entire embryonic mesenchyme | 1.88e-11 | 160 |
muscle tissue | 3.31e-11 | 64 |
musculature | 3.31e-11 | 64 |
musculature of body | 3.31e-11 | 64 |
trunk mesenchyme | 3.39e-11 | 122 |
dense mesenchyme tissue | 2.73e-10 | 73 |
skeletal muscle tissue | 3.18e-10 | 62 |
striated muscle tissue | 3.18e-10 | 62 |
myotome | 3.18e-10 | 62 |
somite | 4.19e-10 | 71 |
presomitic mesoderm | 4.19e-10 | 71 |
presumptive segmental plate | 4.19e-10 | 71 |
dermomyotome | 4.19e-10 | 71 |
trunk paraxial mesoderm | 4.19e-10 | 71 |
epithelial vesicle | 5.95e-10 | 78 |
paraxial mesoderm | 8.76e-10 | 72 |
presumptive paraxial mesoderm | 8.76e-10 | 72 |
mesoderm | 2.92e-09 | 315 |
mesoderm-derived structure | 2.92e-09 | 315 |
presumptive mesoderm | 2.92e-09 | 315 |
trunk | 2.99e-08 | 199 |
multilaminar epithelium | 8.19e-08 | 83 |
primary circulatory organ | 1.87e-07 | 27 |