FFCP PHASE1:Hg19::chr20:42339655..42339667,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:42339655..42339667,+ | |||
|coexpression_cluster_id=C1763 | |||
|description=CAGE_peak_at_chr20:42339655..42339667,+ | |description=CAGE_peak_at_chr20:42339655..42339667,+ | ||
|id=chr20:42339655..42339667,+ | |id=chr20:42339655..42339667,+ | ||
|ontology_enrichment_celltype=CL:0000945!8.43e-45!24;CL:0000826!8.43e-45!24;CL:0000784!1.75e-34!3;CL:0000838!2.56e-24!52;CL:0000542!7.82e-24!53;CL:0000051!7.82e-24!53;CL:0000738!1.50e-13!140;CL:0000946!2.75e-12!1;CL:0000786!2.75e-12!1;CL:0000980!2.75e-12!1;CL:0002087!1.15e-11!119;CL:0002031!3.93e-11!124;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0000988!5.63e-10!182;CL:0000451!7.40e-10!10;CL:0002032!5.98e-08!165;CL:0000837!5.98e-08!165;CL:0000236!1.14e-07!14;CL:0000785!9.02e-07!2;CL:0000955!9.02e-07!2;CL:0000818!9.02e-07!2;CL:0000954!9.02e-07!2;CL:0000816!9.02e-07!2 | |ontology_enrichment_celltype=CL:0000945!8.43e-45!24;CL:0000826!8.43e-45!24;CL:0000784!1.75e-34!3;CL:0000838!2.56e-24!52;CL:0000542!7.82e-24!53;CL:0000051!7.82e-24!53;CL:0000738!1.50e-13!140;CL:0000946!2.75e-12!1;CL:0000786!2.75e-12!1;CL:0000980!2.75e-12!1;CL:0002087!1.15e-11!119;CL:0002031!3.93e-11!124;CL:0000037!1.14e-10!172;CL:0000566!1.14e-10!172;CL:0000988!5.63e-10!182;CL:0000451!7.40e-10!10;CL:0002032!5.98e-08!165;CL:0000837!5.98e-08!165;CL:0000236!1.14e-07!14;CL:0000785!9.02e-07!2;CL:0000955!9.02e-07!2;CL:0000818!9.02e-07!2;CL:0000954!9.02e-07!2;CL:0000816!9.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.03e-98;3!CL:0000451;1.40e-27;10!CL:0000945;3.63e-13;24!CL:0000840;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.92e-98,3;CL:0000451,1.68e-27,10;CL:0000945,3.34e-13,24;CL:0000826,3.34e-13,24;CL:0000738,4.36e-09,136;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177;CL:0000840,8.97e-07,5;CL:0001029,8.97e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!1.40e-12!1;DOID:0050177!1.40e-12!1;DOID:0050427!1.40e-12!1;DOID:2355!3.45e-12!1;DOID:0060058!2.10e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!2.20e-12!1;UBERON:0001153!2.20e-12!1;UBERON:0002372!3.85e-12!1;UBERON:0001961!3.85e-12!1;UBERON:0001744!3.85e-12!1;UBERON:0001735!3.85e-12!1;UBERON:0002370!1.10e-11!4;UBERON:0005058!1.10e-11!4;UBERON:0009113!1.10e-11!4;UBERON:0003295!1.10e-11!4;UBERON:0005562!1.10e-11!4;UBERON:0001042!2.90e-10!10;UBERON:0009145!2.90e-10!10;UBERON:0006562!2.21e-09!11;UBERON:0003351!4.35e-08!6;UBERON:0004177!4.71e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr20:42339655..42339667,+ | |short_description=p@chr20:42339655..42339667,+ | ||
}} | }} |
Latest revision as of 14:08, 28 July 2015
Short description: | p@chr20:42339655..42339667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:42339655..42339667, + |
Coexpression cluster: | C1763_Dendritic_B_migratory_immature_CD19_CD34_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.92e-98 | 3 |
dendritic cell | 1.68e-27 | 10 |
lymphocyte of B lineage | 3.34e-13 | 24 |
pro-B cell | 3.34e-13 | 24 |
leukocyte | 4.36e-09 | 136 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
immature conventional dendritic cell | 8.97e-07 | 5 |
common dendritic progenitor | 8.97e-07 | 5 |