FFCP PHASE1:Hg19::chr16:89043350..89043370,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=863 | |EntrezGene=863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1537 | |HGNC=1537 | ||
|TSSclassifier=strong | |||
|UniProt=O75081 | |UniProt=O75081 | ||
|association_with_transcript=2bp_to_ENST00000268679_5end | |association_with_transcript=2bp_to_ENST00000268679_5end | ||
|cluster_id=chr16:89043350..89043370,- | |||
|coexpression_cluster_id=C1340 | |||
|description=CAGE_peak_5_at_CBFA2T3_5end | |description=CAGE_peak_5_at_CBFA2T3_5end | ||
|id=chr16:89043350..89043370,- | |id=chr16:89043350..89043370,- | ||
|ontology_enrichment_celltype=CL:0000037!1.11e-50!172;CL:0000566!1.11e-50!172;CL:0000988!1.64e-46!182;CL:0002032!1.47e-44!165;CL:0000837!1.47e-44!165;CL:0000763!6.92e-40!112;CL:0000049!6.92e-40!112;CL:0000738!1.72e-20!140;CL:0002031!1.09e-19!124;CL:0002087!3.66e-17!119;CL:0000839!3.24e-16!70;CL:0000557!1.25e-14!71;CL:0000766!6.55e-13!76;CL:0000134!1.66e-12!358;CL:0002320!7.63e-12!365;CL:0000945!1.73e-11!24;CL:0000826!1.73e-11!24;CL:0002194!5.54e-10!63;CL:0000576!5.54e-10!63;CL:0000040!5.54e-10!63;CL:0000559!5.54e-10!63;CL:0000236!5.86e-10!14;CL:0000219!1.51e-09!390;CL:0002009!1.80e-09!65;CL:0002274!1.82e-09!5;CL:0000457!1.82e-09!5;CL:0002191!1.82e-09!5;CL:0000097!1.82e-09!5;CL:0000831!1.82e-09!5;CL:0002028!1.82e-09!5;CL:0000034!7.70e-08!444;CL:0000048!2.72e-07!430;CL:0000723!6.42e-07!436 | |ontology_enrichment_celltype=CL:0000037!1.11e-50!172;CL:0000566!1.11e-50!172;CL:0000988!1.64e-46!182;CL:0002032!1.47e-44!165;CL:0000837!1.47e-44!165;CL:0000763!6.92e-40!112;CL:0000049!6.92e-40!112;CL:0000738!1.72e-20!140;CL:0002031!1.09e-19!124;CL:0002087!3.66e-17!119;CL:0000839!3.24e-16!70;CL:0000557!1.25e-14!71;CL:0000766!6.55e-13!76;CL:0000134!1.66e-12!358;CL:0002320!7.63e-12!365;CL:0000945!1.73e-11!24;CL:0000826!1.73e-11!24;CL:0002194!5.54e-10!63;CL:0000576!5.54e-10!63;CL:0000040!5.54e-10!63;CL:0000559!5.54e-10!63;CL:0000236!5.86e-10!14;CL:0000219!1.51e-09!390;CL:0002009!1.80e-09!65;CL:0002274!1.82e-09!5;CL:0000457!1.82e-09!5;CL:0002191!1.82e-09!5;CL:0000097!1.82e-09!5;CL:0000831!1.82e-09!5;CL:0002028!1.82e-09!5;CL:0000034!7.70e-08!444;CL:0000048!2.72e-07!430;CL:0000723!6.42e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.61e-21;5!CL:0000784;1.11e-13;3!CL:0000163;7.35e-12;9!CL:0000763;1.79e-11;100!CL:0000764;2.11e-09;2!CL:0000558;2.11e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.38e-36,168;CL:0000988,1.44e-33,177;CL:0000763,1.04e-32,108;CL:0000049,1.04e-32,108;CL:0002032,1.44e-31,161;CL:0000837,1.44e-31,161;CL:0000097,1.32e-21,5;CL:0002028,1.32e-21,5;CL:0000784,1.14e-13,3;CL:0000134,1.37e-12,354;CL:0002320,3.51e-12,361;CL:0000163,6.61e-12,9;CL:0000034,7.38e-11,441;CL:0000219,9.76e-11,386;CL:0000764,1.81e-09,2;CL:0000765,1.81e-09,2;CL:0000050,1.81e-09,2;CL:0000038,1.81e-09,2;CL:0000558,1.81e-09,2;CL:0000547,1.81e-09,2;CL:0000549,1.81e-09,2;CL:0000550,1.81e-09,2;CL:0000552,1.81e-09,2;CL:0000048,5.69e-09,427;CL:0000723,9.97e-09,433 | |||
|ontology_enrichment_development_v019=CL:0000049;7.58e-10;108 | |||
|ontology_enrichment_disease=DOID:8692!4.23e-40!31;DOID:1240!5.10e-40!39;DOID:2531!7.77e-30!51;DOID:0060083!7.77e-30!51;DOID:1036!1.50e-11!8 | |ontology_enrichment_disease=DOID:8692!4.23e-40!31;DOID:1240!5.10e-40!39;DOID:2531!7.77e-30!51;DOID:0060083!7.77e-30!51;DOID:1036!1.50e-11!8 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.35e-59;31!DOID:1240;3.20e-50;39!DOID:2531;1.84e-31;51!DOID:0060083;1.84e-31;51!DOID:1036;1.42e-27;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.18e-61,39;DOID:8692,1.34e-60,31;DOID:2531,1.46e-45,51;DOID:0060083,1.46e-45,51;DOID:1036,1.24e-27,8;DOID:0050686,3.33e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.80e-18!102;UBERON:0003061!2.80e-18!102;UBERON:0002193!1.37e-17!112;UBERON:0002371!4.59e-13!80;UBERON:0001474!1.60e-11!86;UBERON:0002384!6.02e-11!375;UBERON:0002405!1.07e-10!115;UBERON:0004765!1.56e-08!101;UBERON:0001434!1.56e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.27e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.393553906568396,0.393364276848904,0,0,0,0,0,0.387336002901508,0,2.05520307534393,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.422510572623884,0.850417199860174,0.838634582033504,0.22465726229299,0,0.48217676009124,1.14005097496499,0,0.91332076882317,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,2.29900975981793,0.661044872784862,0,0,0.587237189370939,0,9.25199300053181,6.1655941927969,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0.26591592103773,4.05434061319081,1.71598473234038,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,1.97065295158377,2.20121085033065,3.31724984865235,2.59415916150531,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,1.8300481571743,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,1.30062222588003,0.432807638929335,1.28055318027145,0,6.98527800014858,3.06408592211787,10.3720055534703,0,4.21195767170188,3.42352018549788,0.313359791546046,5.01268954180134,3.55512733383367,0.481764225311099,0.605399121573143,0,2.40453741329035,0.307240764308458,0.223676107892416,0.667396566847634,0.781552381608161,5.2897173040096,8.61611792633986,16.768252065511,34.6394846717733,47.9355817298688,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,1.23084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,2.98262487150547,10.9699710054103,10.3774003883903,7.25431376975636,7.55197141391292,4.55408958538044,12.2381165814892,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,1.57732412567589,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,12.8885257576462,0,0,0,0,0,0,0,0,0,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0.4226557275834,0,1.97366227757693,1.99819452718089,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.535928260312357,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,0,0,0.80822463617505,0.143444410785353,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.393553906568396,0.393364276848904,0,0,0,0,0,0.387336002901508,0,2.05520307534393,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0.709446689665756,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.422510572623884,0.850417199860174,0.838634582033504,0.22465726229299,0,0.48217676009124,1.14005097496499,0,0.91332076882317,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,2.29900975981793,0.661044872784862,0,0,0.587237189370939,0,9.25199300053181,6.1655941927969,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0.26591592103773,4.05434061319081,1.71598473234038,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,1.97065295158377,2.20121085033065,3.31724984865235,2.59415916150531,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41185864310528,1.8300481571743,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0,0,0,1.30062222588003,0.432807638929335,1.28055318027145,0,6.98527800014858,3.06408592211787,10.3720055534703,0,4.21195767170188,3.42352018549788,0.313359791546046,5.01268954180134,3.55512733383367,0.481764225311099,0.605399121573143,0,2.40453741329035,0.307240764308458,0.223676107892416,0.667396566847634,0.781552381608161,5.2897173040096,8.61611792633986,16.768252065511,34.6394846717733,47.9355817298688,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,1.23084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,2.98262487150547,10.9699710054103,10.3774003883903,7.25431376975636,7.55197141391292,4.55408958538044,12.2381165814892,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10986352267889,0,1.57732412567589,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,12.8885257576462,0,0,0,0,0,0,0,0,0,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0.4226557275834,0,1.97366227757693,1.99819452718089,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0.535928260312357,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,0,0,0.80822463617505,0.143444410785353,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p5@CBFA2T3 | |short_description=p5@CBFA2T3 | ||
}} | }} |
Latest revision as of 10:46, 18 September 2015
Short description: | p5@CBFA2T3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CBFA2T3_5end |
Coexpression cluster: | C1340_acute_chronic_granulocyte_leukemia_CD34_Mast_Dendritic |
Association with transcript: | 2bp_to_ENST00000268679_5end |
EntrezGene: | CBFA2T3 |
HGNC: | 1537 |
UniProt: | O75081 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.38e-36 | 168 |
hematopoietic cell | 1.44e-33 | 177 |
myeloid cell | 1.04e-32 | 108 |
common myeloid progenitor | 1.04e-32 | 108 |
hematopoietic oligopotent progenitor cell | 1.44e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-31 | 161 |
mast cell | 1.32e-21 | 5 |
basophil mast progenitor cell | 1.32e-21 | 5 |
plasmacytoid dendritic cell | 1.14e-13 | 3 |
mesenchymal cell | 1.37e-12 | 354 |
connective tissue cell | 3.51e-12 | 361 |
endocrine cell | 6.61e-12 | 9 |
stem cell | 7.38e-11 | 441 |
motile cell | 9.76e-11 | 386 |
erythroid lineage cell | 1.81e-09 | 2 |
erythroblast | 1.81e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 1.81e-09 | 2 |
erythroid progenitor cell | 1.81e-09 | 2 |
reticulocyte | 1.81e-09 | 2 |
proerythroblast | 1.81e-09 | 2 |
basophilic erythroblast | 1.81e-09 | 2 |
polychromatophilic erythroblast | 1.81e-09 | 2 |
orthochromatic erythroblast | 1.81e-09 | 2 |
multi fate stem cell | 5.69e-09 | 427 |
somatic stem cell | 9.97e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.27e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.18e-61 | 39 |
myeloid leukemia | 1.34e-60 | 31 |
hematologic cancer | 1.46e-45 | 51 |
immune system cancer | 1.46e-45 | 51 |
chronic leukemia | 1.24e-27 | 8 |
organ system cancer | 3.33e-13 | 137 |