FFCP PHASE1:Hg19::chr17:38121772..38121789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284110 | |EntrezGene=284110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13311 | |HGNC=13311 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_uc002htm.1_5end | |association_with_transcript=-121bp_to_uc002htm.1_5end | ||
|cluster_id=chr17:38121772..38121789,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_GSDMA_5end | |description=CAGE_peak_3_at_GSDMA_5end | ||
|id=chr17:38121772..38121789,+ | |id=chr17:38121772..38121789,+ | ||
|ontology_enrichment_celltype=CL:0002619!9.38e-16!3;CL:0000235!4.90e-08!10 | |ontology_enrichment_celltype=CL:0002619!9.38e-16!3;CL:0000235!4.90e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.99e-60;3!CL:0000235;2.06e-30;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.99e-60,3;CL:0000235,2.06e-30,6;CL:0002194,6.16e-12,59;CL:0000576,6.16e-12,59;CL:0000040,6.16e-12,59;CL:0000559,6.16e-12,59;CL:0002009,1.50e-11,61;CL:0000839,1.11e-10,66;CL:0000557,1.60e-10,67;CL:0000766,8.56e-10,72 | |||
|ontology_enrichment_development_v019=UBERON:0010115;5.16e-21;1!UBERON:0010227;8.53e-21;1!UBERON:0007297;4.30e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.36e-27!115;UBERON:0002081!8.97e-11!2;UBERON:0004151!1.90e-07!3;UBERON:0003978!2.29e-07!3;UBERON:0009751!2.29e-07!3;UBERON:0000946!2.29e-07!3;UBERON:0002523!2.29e-07!3;UBERON:0005983!2.29e-07!3;UBERON:0002165!2.29e-07!3;UBERON:0002062!2.29e-07!3;UBERON:0007280!2.29e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.16e-21;1!UBERON:0000029;5.16e-21;1!UBERON:0002079;8.53e-21;1!UBERON:0001301;8.53e-21;1!UBERON:0002360;3.35e-11;2!UBERON:0000094;3.35e-11;2!UBERON:0010743;3.35e-11;2!UBERON:0002081;4.30e-11;2!UBERON:0004151;8.02e-08;3!UBERON:0006947;8.02e-08;3!UBERON:0004054;8.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.22e-21,1;UBERON:0002363,6.31e-21,1;UBERON:0007645,6.31e-21,1;UBERON:0007647,6.31e-21,1;UBERON:0010115,6.31e-21,1;UBERON:0002079,7.72e-21,1;UBERON:0001301,9.43e-21,1;UBERON:0002360,3.70e-11,2;UBERON:0000094,3.70e-11,2;UBERON:0010743,3.70e-11,2;UBERON:0002081,4.09e-11,2;UBERON:0010227,4.09e-11,2;UBERON:0002405,3.51e-10,93;UBERON:0002371,2.80e-09,76;UBERON:0002193,9.72e-09,108;UBERON:0001474,1.34e-08,82;UBERON:0004151,7.76e-08,3;UBERON:0004765,7.91e-08,90;UBERON:0006947,8.29e-08,3;UBERON:0004054,8.29e-08,3;UBERON:0002390,3.51e-07,98;UBERON:0003061,3.51e-07,98;UBERON:0001434,4.91e-07,100 | |||
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|short_description=p3@GSDMA | |short_description=p3@GSDMA | ||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p3@GSDMA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GSDMA_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -121bp_to_uc002htm.1_5end |
EntrezGene: | GSDMA |
HGNC: | 13311 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.99e-60 | 3 |
macrophage | 2.06e-30 | 6 |
monopoietic cell | 6.16e-12 | 59 |
monocyte | 6.16e-12 | 59 |
monoblast | 6.16e-12 | 59 |
promonocyte | 6.16e-12 | 59 |
macrophage dendritic cell progenitor | 1.50e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.11e-10 | 66 |
granulocyte monocyte progenitor cell | 1.60e-10 | 67 |
myeloid leukocyte | 8.56e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.22e-21 | 1 |
dura mater | 6.31e-21 | 1 |
future meninx | 6.31e-21 | 1 |
ectomeninx | 6.31e-21 | 1 |
future dura mater | 6.31e-21 | 1 |
left cardiac atrium | 7.72e-21 | 1 |
epididymis | 9.43e-21 | 1 |
meninx | 3.70e-11 | 2 |
membrane organ | 3.70e-11 | 2 |
meningeal cluster | 3.70e-11 | 2 |
cardiac atrium | 4.09e-11 | 2 |
future cardiac atrium | 4.09e-11 | 2 |
immune system | 3.51e-10 | 93 |
bone marrow | 2.80e-09 | 76 |
hemolymphoid system | 9.72e-09 | 108 |
bone element | 1.34e-08 | 82 |
cardiac chamber | 7.76e-08 | 3 |
skeletal element | 7.91e-08 | 90 |
male genital duct | 8.29e-08 | 3 |
internal male genitalia | 8.29e-08 | 3 |
hematopoietic system | 3.51e-07 | 98 |
blood island | 3.51e-07 | 98 |
skeletal system | 4.91e-07 | 100 |