Personal tools

FFCP PHASE1:Hg19::chr17:38261177..38261211,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr17:38261177..38261211,-
|coexpression_cluster_id=C202
|description=CAGE_peak_at_chr17:38261177..38261211,-
|description=CAGE_peak_at_chr17:38261177..38261211,-
|id=chr17:38261177..38261211,-
|id=chr17:38261177..38261211,-
|ontology_enrichment_celltype=CL:0002322!2.35e-28!5;CL:0002623!1.60e-27!3;CL:0000622!9.03e-17!5;CL:0000154!4.51e-14!6;CL:0000946!3.40e-10!1;CL:0000786!3.40e-10!1;CL:0000980!3.40e-10!1;CL:0000150!1.49e-09!9;CL:0000148!1.48e-08!10;CL:0000541!1.48e-08!10
|ontology_enrichment_celltype=CL:0002322!2.35e-28!5;CL:0002623!1.60e-27!3;CL:0000622!9.03e-17!5;CL:0000154!4.51e-14!6;CL:0000946!3.40e-10!1;CL:0000786!3.40e-10!1;CL:0000980!3.40e-10!1;CL:0000150!1.49e-09!9;CL:0000148!1.48e-08!10;CL:0000541!1.48e-08!10
|ontology_enrichment_celltype_v019=CL:0002322;2.32e-48;5!CL:0002623;1.21e-46;3!CL:0000622;2.53e-28;5!CL:0000154;9.87e-24;6!CL:0000946;1.79e-16;1!CL:0000786;1.79e-16;1!CL:0002321;1.97e-16;15!CL:0000150;4.66e-16;9!CL:0000148;2.33e-14;10!CL:0000147;1.97e-10;14!CL:0000082;6.94e-08;19!CL:0002251;1.52e-07;20!CL:0000710;1.81e-07;20!CL:0000151;3.68e-07;36
|ontology_enrichment_celltype_v019_2=CL:0002322,2.32e-48,5;CL:0002623,1.21e-46,3;CL:0000622,2.53e-28,5;CL:0000154,9.87e-24,6;CL:0000946,1.65e-16,1;CL:0000786,1.65e-16,1;CL:0000980,1.65e-16,1;CL:0000150,4.66e-16,9;CL:0000148,2.33e-14,10;CL:0000541,2.33e-14,10;CL:0000147,1.97e-10,14;CL:0000785,6.42e-09,2;CL:0000955,6.42e-09,2;CL:0000818,6.42e-09,2;CL:0000954,6.42e-09,2;CL:0000816,6.42e-09,2;CL:0000082,7.11e-08,19;CL:0002251,1.52e-07,20;CL:0000710,1.81e-07,20;CL:0000151,4.07e-07,36
|ontology_enrichment_development_v019=CL:0000954;6.67e-09;2
|ontology_enrichment_disease=DOID:5409!7.91e-10!4;DOID:3905!1.67e-09!9
|ontology_enrichment_disease=DOID:5409!7.91e-10!4;DOID:3905!1.67e-09!9
|ontology_enrichment_disease_v019=DOID:5409;3.07e-16;4!DOID:3905;5.43e-16;9!DOID:1324;7.67e-10;15!DOID:1325;1.09e-09;7!DOID:3904;1.09e-09;7!DOID:0050615;2.91e-09;16
|ontology_enrichment_disease_v019_2=DOID:5409,3.32e-16,4;DOID:3905,5.72e-16,9;DOID:1324,7.90e-10,15;DOID:1325,1.13e-09,7;DOID:3904,1.13e-09,7;DOID:0050615,3.00e-09,16
|ontology_enrichment_uberon=UBERON:0001044!4.51e-14!6;UBERON:0003293!4.51e-14!6;UBERON:0003294!4.51e-14!6;UBERON:0010047!4.51e-14!6;UBERON:0000167!4.51e-14!6;UBERON:0000078!4.93e-12!18;UBERON:0000166!2.71e-10!21;UBERON:0002372!1.17e-09!1;UBERON:0001961!1.17e-09!1;UBERON:0001744!1.17e-09!1;UBERON:0001735!1.17e-09!1;UBERON:0003408!1.20e-08!10;UBERON:0000165!1.12e-07!28;UBERON:0000930!1.12e-07!28;UBERON:0001004!8.55e-07!72
|ontology_enrichment_uberon_v019=UBERON:0001044;9.87e-24;6!UBERON:0003293;9.87e-24;6!UBERON:0003294;9.87e-24;6!UBERON:0010047;9.87e-24;6!UBERON:0003408;9.87e-24;6!UBERON:0000167;9.87e-24;6!UBERON:0001041;1.52e-10;14!UBERON:0000161;6.47e-08;19!UBERON:0000166;6.47e-08;19!UBERON:0004802;6.94e-08;19!UBERON:0000115;6.94e-08;19!UBERON:0002048;7.03e-07;22!UBERON:0004807;7.03e-07;22!UBERON:0000117;7.03e-07;22!UBERON:0000171;7.03e-07;22!UBERON:0000170;7.03e-07;22
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.87e-24,6;UBERON:0003293,9.87e-24,6;UBERON:0003294,9.87e-24,6;UBERON:0010047,9.87e-24,6;UBERON:0000167,9.87e-24,6;UBERON:0003408,1.61e-14,10;UBERON:0004802,7.11e-08,19;UBERON:0000115,7.11e-08,19;UBERON:0001004,3.05e-07,74;UBERON:0000166,6.62e-07,22;UBERON:0002048,7.18e-07,22;UBERON:0000117,7.18e-07,22;UBERON:0000171,7.18e-07,22;UBERON:0000170,7.18e-07,22;UBERON:0005597,7.18e-07,22;UBERON:0000118,7.18e-07,22
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29421201681249,3.97589304964456,5.46111531486736,7.98190123618352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6195066754756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9295421599622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56833729067942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1267799839017,4.26796192734875,58.0658115923837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5838880792036,0,6.37654997123489,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29421201681249,3.97589304964456,5.46111531486736,7.98190123618352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6195066754756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3429871466276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9295421599622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56833729067942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1267799839017,4.26796192734875,58.0658115923837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5838880792036,0,6.37654997123489,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr17:38261177..38261211,-
|short_description=p@chr17:38261177..38261211,-
}}
}}

Latest revision as of 16:19, 25 July 2015

Short description:p@chr17:38261177..38261211, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr17:38261177..38261211, -
Coexpression cluster:C202_salivary_skin_penis_tongue_uterus_cervical_immature
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
10
20
30
40
50
60




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr17:38261177..38261211,-&oldid=3407686"