FFCP PHASE1:Hg19::chr17:38610240..38610307,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38610240..38610307,- | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38610240..38610307,- | |description=CAGE_peak_at_chr17:38610240..38610307,- | ||
|id=chr17:38610240..38610307,- | |id=chr17:38610240..38610307,- | ||
|ontology_enrichment_celltype=CL:0000055!7.92e-25!180;CL:0000222!9.01e-17!119;CL:0000057!9.91e-16!75;CL:0000183!1.05e-13!59;CL:0000680!1.52e-13!57;CL:0000056!1.52e-13!57;CL:0000355!1.52e-13!57;CL:0000187!3.00e-12!54;CL:0000192!4.60e-11!42;CL:0000514!4.60e-11!42;CL:0000393!8.67e-11!60;CL:0000211!8.67e-11!60;CL:0000359!7.27e-08!32;CL:0002334!2.06e-07!12;CL:0000220!2.63e-07!246;CL:0002321!4.45e-07!248 | |ontology_enrichment_celltype=CL:0000055!7.92e-25!180;CL:0000222!9.01e-17!119;CL:0000057!9.91e-16!75;CL:0000183!1.05e-13!59;CL:0000680!1.52e-13!57;CL:0000056!1.52e-13!57;CL:0000355!1.52e-13!57;CL:0000187!3.00e-12!54;CL:0000192!4.60e-11!42;CL:0000514!4.60e-11!42;CL:0000393!8.67e-11!60;CL:0000211!8.67e-11!60;CL:0000359!7.27e-08!32;CL:0002334!2.06e-07!12;CL:0000220!2.63e-07!246;CL:0002321!4.45e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.49e-09;43!CL:0002334;4.39e-09;12!CL:0000359;2.15e-08;32!CL:0000187;1.29e-07;55!CL:0000057;6.51e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.86e-17,76;CL:0000680,9.45e-16,58;CL:0000056,9.45e-16,58;CL:0000355,9.45e-16,58;CL:0000222,1.08e-14,121;CL:0000187,3.98e-14,55;CL:0000192,4.04e-13,43;CL:0000514,4.04e-13,43;CL:0000393,2.60e-11,61;CL:0000211,2.60e-11,61;CL:0002334,4.04e-09,12;CL:0000359,6.59e-09,32;CL:0000048,1.11e-07,427;CL:0000723,4.84e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.49e-09;43!CL:0000355;4.25e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!4.70e-19!138;UBERON:0005256!6.37e-18!143;UBERON:0002100!7.37e-16!216;UBERON:0003914!8.23e-16!118;UBERON:0004872!2.64e-15!84;UBERON:0002049!1.01e-14!79;UBERON:0007798!1.01e-14!79;UBERON:0002385!6.71e-14!63;UBERON:0001015!6.71e-14!63;UBERON:0000383!6.71e-14!63;UBERON:0001134!1.01e-13!61;UBERON:0002036!1.01e-13!61;UBERON:0003082!1.01e-13!61;UBERON:0000914!1.14e-13!83;UBERON:0002329!1.14e-13!83;UBERON:0003077!1.14e-13!83;UBERON:0003059!1.14e-13!83;UBERON:0007282!1.14e-13!83;UBERON:0009618!1.14e-13!83;UBERON:0007285!1.14e-13!83;UBERON:0000486!1.08e-12!82;UBERON:0004290!1.67e-12!70;UBERON:0001981!2.16e-11!60;UBERON:0007500!2.16e-11!60;UBERON:0004537!2.16e-11!60;UBERON:0006965!2.16e-11!60;UBERON:0000055!7.17e-11!69;UBERON:0000475!1.24e-10!365;UBERON:0001009!1.67e-10!113;UBERON:0004535!2.76e-10!110;UBERON:0003104!3.33e-10!238;UBERON:0009142!3.33e-10!238;UBERON:0000481!4.36e-10!347;UBERON:0001637!5.69e-10!42;UBERON:0003509!5.69e-10!42;UBERON:0004572!5.69e-10!42;UBERON:0000119!1.08e-09!312;UBERON:0000483!2.81e-09!309;UBERON:0000477!2.89e-09!286;UBERON:0000468!4.37e-08!659;UBERON:0004573!7.97e-08!33;UBERON:0004571!7.97e-08!33 | |ontology_enrichment_uberon=UBERON:0000490!4.70e-19!138;UBERON:0005256!6.37e-18!143;UBERON:0002100!7.37e-16!216;UBERON:0003914!8.23e-16!118;UBERON:0004872!2.64e-15!84;UBERON:0002049!1.01e-14!79;UBERON:0007798!1.01e-14!79;UBERON:0002385!6.71e-14!63;UBERON:0001015!6.71e-14!63;UBERON:0000383!6.71e-14!63;UBERON:0001134!1.01e-13!61;UBERON:0002036!1.01e-13!61;UBERON:0003082!1.01e-13!61;UBERON:0000914!1.14e-13!83;UBERON:0002329!1.14e-13!83;UBERON:0003077!1.14e-13!83;UBERON:0003059!1.14e-13!83;UBERON:0007282!1.14e-13!83;UBERON:0009618!1.14e-13!83;UBERON:0007285!1.14e-13!83;UBERON:0000486!1.08e-12!82;UBERON:0004290!1.67e-12!70;UBERON:0001981!2.16e-11!60;UBERON:0007500!2.16e-11!60;UBERON:0004537!2.16e-11!60;UBERON:0006965!2.16e-11!60;UBERON:0000055!7.17e-11!69;UBERON:0000475!1.24e-10!365;UBERON:0001009!1.67e-10!113;UBERON:0004535!2.76e-10!110;UBERON:0003104!3.33e-10!238;UBERON:0009142!3.33e-10!238;UBERON:0000481!4.36e-10!347;UBERON:0001637!5.69e-10!42;UBERON:0003509!5.69e-10!42;UBERON:0004572!5.69e-10!42;UBERON:0000119!1.08e-09!312;UBERON:0000483!2.81e-09!309;UBERON:0000477!2.89e-09!286;UBERON:0000468!4.37e-08!659;UBERON:0004573!7.97e-08!33;UBERON:0004571!7.97e-08!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.48e-08;42!UBERON:0003509;1.48e-08;42!UBERON:0004572;1.48e-08;42!UBERON:0004573;5.93e-08;33!UBERON:0004571;5.93e-08;33!UBERON:0002385;2.89e-07;31!UBERON:0001015;2.89e-07;31!UBERON:0000383;2.89e-07;31!UBERON:0002384;5.74e-07;198!UBERON:0004457;6.03e-07;9!UBERON:0000042;6.03e-07;9 | |||
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| ||
|short_description=p@chr17:38610240..38610307,- | |short_description=p@chr17:38610240..38610307,- | ||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38610240..38610307, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38610240..38610307, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.86e-17 | 76 |
muscle precursor cell | 9.45e-16 | 58 |
myoblast | 9.45e-16 | 58 |
multi-potent skeletal muscle stem cell | 9.45e-16 | 58 |
mesodermal cell | 1.08e-14 | 121 |
muscle cell | 3.98e-14 | 55 |
smooth muscle cell | 4.04e-13 | 43 |
smooth muscle myoblast | 4.04e-13 | 43 |
electrically responsive cell | 2.60e-11 | 61 |
electrically active cell | 2.60e-11 | 61 |
preadipocyte | 4.04e-09 | 12 |
vascular associated smooth muscle cell | 6.59e-09 | 32 |
multi fate stem cell | 1.11e-07 | 427 |
somatic stem cell | 4.84e-07 | 433 |