FFCP PHASE1:Hg19::chr17:43325279..43325284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100133991 | |EntrezGene=100133991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_NR_024434,uc010dah.2_5end | |association_with_transcript=-18bp_to_NR_024434,uc010dah.2_5end | ||
|cluster_id=chr17:43325279..43325284,+ | |||
|description=CAGE_peak_3_at_LOC100133991_5end | |description=CAGE_peak_3_at_LOC100133991_5end | ||
|id=chr17:43325279..43325284,+ | |id=chr17:43325279..43325284,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.44e-10!52;CL:0000542!9.08e-10!53;CL:0000051!9.08e-10!53;CL:0000084!1.35e-09!25;CL:0000827!1.35e-09!25;CL:0000791!3.09e-08!18;CL:0000789!3.09e-08!18;CL:0002420!3.09e-08!18;CL:0002419!3.09e-08!18;CL:0000790!3.09e-08!18 | |ontology_enrichment_celltype=CL:0000838!3.44e-10!52;CL:0000542!9.08e-10!53;CL:0000051!9.08e-10!53;CL:0000084!1.35e-09!25;CL:0000827!1.35e-09!25;CL:0000791!3.09e-08!18;CL:0000789!3.09e-08!18;CL:0002420!3.09e-08!18;CL:0002419!3.09e-08!18;CL:0000790!3.09e-08!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.05e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;5.74e-10;8!DOID:630;1.05e-09;1!DOID:0050177;1.05e-09;1!DOID:0050427;1.05e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.87e-10,1;DOID:0050177,4.87e-10,1;DOID:0050427,4.87e-10,1;DOID:1036,5.94e-10,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.12e-17;2!UBERON:0005058;1.12e-17;2!UBERON:0009113;1.12e-17;2!UBERON:0001154;1.05e-09;1!UBERON:0001153;1.05e-09;1!UBERON:0009854;1.05e-09;1!UBERON:0000964;2.67e-09;4!UBERON:0010409;2.67e-09;4!UBERON:0004177;1.31e-07;5!UBERON:0005057;1.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.43e-09,4;UBERON:0005058,1.43e-09,4;UBERON:0009113,1.43e-09,4;UBERON:0003295,1.43e-09,4;UBERON:0005562,1.43e-09,4;UBERON:0001154,1.76e-09,1;UBERON:0001153,1.76e-09,1;UBERON:0001045,1.76e-09,1;UBERON:0000964,4.59e-09,4;UBERON:0010409,4.59e-09,4;UBERON:0004348,4.59e-09,4;UBERON:0005427,4.59e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0.382067028739756,0.246301768349837,0.236132343941038,0,0,0.309632246632152,0.919421224478927,0.6024118375565,0,0.232401601740905,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,1.37696839079683,0.393010762749165,0.822405995998037,0.334372990781356,0.32592226663359,0.946895611469467,0,0.111410456885174,0.294605907474837,0.443067789167242,0.812411591295047,0.512365278902701,0.520237390239513,0.164437904603676,0,0,1.33457906845854,2.67540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0,0,0.752875595388864,0.76791966692651,0,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0.724122019413995,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.0945348171640679,0,0.351339142772504,0,0.728590576585084,1.11235332835329,0,0,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0.622422070799533,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.860413786167011,0.243947412259191,0.397589304964456,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,1.1240175325762,0.301586917234893,0.370353780634118,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0.44024217006613,0.621984346622316,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,1.08524321078289,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.552485933615378,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.527758144464379,1.13733384070897,0,0,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.495854746082934,0.768760269460425,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0,0,0,0.443430153536676,0.918893600827838,1.01489521846434,0,0.569647187174163,0.714695326373367,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0,0.640276590135727,0.478278818186467,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0.166849141711909,0,1.67043704337145,0,0,0.66614393599564,0,0,0,0.606802608747567,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0.63337622438398,0.398495976502139,1.10513566212459,0,0.20453736500431,0.246169610922139,0,0,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0.254253650292766,0.236387681767936,1.03423011972439,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0.762569244632931,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0,0,1.35357396370308,1.37243774022418,0.671286347903371,0.189753732724185,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0.941798755221676,1.19472429772959,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0.0633107959558787,0.195551382734803,0.801588202515337,0,0.599428828746391,0,0.572682980829578,0,0.288109595976299,0.124252535565433,0.235694034616795,0.135904206073614,0.418411385249333,0.101998217636322,0.288950589901519,0,0,0,0,1.31443677139657,0,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0.209818352539992,0,1.79287339332845,0.575745591958336,0,0,0.25426853765475,0,0.864221491201268,0,1.19730191562487,0,0,0.453248366080503,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0.612691153526923,0.327872630709804,0.157054096250234,0,0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| ||
|short_description=p3@LOC100133991 | |short_description=p3@LOC100133991 | ||
}} | }} |
Latest revision as of 01:35, 25 September 2015
Short description: | p3@LOC100133991 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100133991_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_NR_024434, uc010dah.2_5end |
EntrezGene: | LOC100133991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.43e-09 | 4 |
hemolymphoid system gland | 1.43e-09 | 4 |
thymic region | 1.43e-09 | 4 |
pharyngeal gland | 1.43e-09 | 4 |
thymus primordium | 1.43e-09 | 4 |
vermiform appendix | 1.76e-09 | 1 |
caecum | 1.76e-09 | 1 |
midgut | 1.76e-09 | 1 |
cornea | 4.59e-09 | 4 |
eye surface | 4.59e-09 | 4 |
optic eminence | 4.59e-09 | 4 |
corneal primordium | 4.59e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.87e-10 | 1 |
monogenic disease | 4.87e-10 | 1 |
xeroderma pigmentosum | 4.87e-10 | 1 |
chronic leukemia | 5.94e-10 | 8 |