FFCP PHASE1:Hg19::chr2:107503700..107503723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84620 | |EntrezGene=84620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10861 | |HGNC=10861 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-136bp_to_ENST00000409087_5end | |association_with_transcript=-136bp_to_ENST00000409087_5end | ||
|cluster_id=chr2:107503700..107503723,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_ST6GAL2_5end | |description=CAGE_peak_10_at_ST6GAL2_5end | ||
|id=chr2:107503700..107503723,- | |id=chr2:107503700..107503723,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.12e-13;6!CL:0000404;2.12e-13;6!CL:0000222;1.83e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.94e-17,8;CL:0000540,2.31e-13,6;CL:0000031,2.31e-13,6;CL:0000404,2.31e-13,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.12e-13;6!UBERON:0000358;1.06e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.68e-37!82;UBERON:0001049!2.64e-36!57;UBERON:0005068!2.64e-36!57;UBERON:0006241!2.64e-36!57;UBERON:0007135!2.64e-36!57;UBERON:0000073!9.54e-35!94;UBERON:0001016!9.54e-35!94;UBERON:0005743!1.05e-34!86;UBERON:0002616!1.49e-30!59;UBERON:0002346!2.31e-30!90;UBERON:0000955!1.66e-29!69;UBERON:0006238!1.66e-29!69;UBERON:0003075!5.93e-29!86;UBERON:0007284!5.93e-29!86;UBERON:0002780!2.72e-28!41;UBERON:0001890!2.72e-28!41;UBERON:0006240!2.72e-28!41;UBERON:0001893!5.17e-28!34;UBERON:0001869!1.83e-27!32;UBERON:0003080!2.00e-27!42;UBERON:0002791!1.30e-26!33;UBERON:0002020!1.62e-25!34;UBERON:0003528!1.62e-25!34;UBERON:0000956!7.37e-25!25;UBERON:0000203!7.37e-25!25;UBERON:0002619!2.35e-23!22;UBERON:0001950!4.07e-23!20;UBERON:0003056!3.54e-22!61;UBERON:0000924!9.83e-21!173;UBERON:0006601!9.83e-21!173;UBERON:0004121!1.67e-19!169;UBERON:0007023!1.66e-18!115;UBERON:0000153!5.28e-17!129;UBERON:0007811!5.28e-17!129;UBERON:0000033!2.24e-16!123;UBERON:0001872!2.07e-10!5;UBERON:0000025!3.51e-10!194;UBERON:0003076!7.18e-10!15;UBERON:0003057!7.18e-10!15;UBERON:0004733!4.46e-08!12;UBERON:0002028!4.46e-08!12;UBERON:0007277!4.46e-08!12;UBERON:0001871!5.12e-08!7;UBERON:0000922!6.87e-08!612;UBERON:0000200!1.87e-07!6;UBERON:0004732!2.40e-07!13;UBERON:0000119!3.18e-07!312;UBERON:0002021!5.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.89e-22;49!UBERON:0001950;5.98e-10;20!UBERON:0005795;1.06e-09;1!UBERON:0002619;4.55e-09;22!UBERON:0005409;6.26e-09;22!UBERON:0000956;5.33e-08;25!UBERON:0000203;5.33e-08;25!UBERON:0002108;1.12e-07;4!UBERON:0002021;1.12e-07;5!UBERON:0001872;1.17e-07;5!UBERON:0000160;1.17e-07;17!UBERON:0002050;1.63e-07;5!UBERON:0005423;1.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.67e-10,81;UBERON:0001950,5.28e-10,20;UBERON:0001016,2.68e-09,89;UBERON:0002619,4.06e-09,22;UBERON:0000956,4.83e-08,25;UBERON:0000203,4.83e-08,25;UBERON:0005409,7.37e-08,25;UBERON:0002021,9.76e-08,5;UBERON:0001872,1.08e-07,5;UBERON:0011216,1.11e-07,223;UBERON:0002108,1.15e-07,4;UBERON:0000160,1.27e-07,17 | |||
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| ||
|short_description=p10@ST6GAL2 | |short_description=p10@ST6GAL2 | ||
}} | }} |
Latest revision as of 05:31, 16 September 2015
Short description: | p10@ST6GAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ST6GAL2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -136bp_to_ENST00000409087_5end |
EntrezGene: | ST6GAL2 |
HGNC: | 10861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.94e-17 | 8 |
neuron | 2.31e-13 | 6 |
neuroblast | 2.31e-13 | 6 |
electrically signaling cell | 2.31e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.67e-10 | 81 |
neocortex | 5.28e-10 | 20 |
nervous system | 2.68e-09 | 89 |
regional part of cerebral cortex | 4.06e-09 | 22 |
cerebral cortex | 4.83e-08 | 25 |
pallium | 4.83e-08 | 25 |
gastrointestinal system | 7.37e-08 | 25 |
occipital lobe | 9.76e-08 | 5 |
parietal lobe | 1.08e-07 | 5 |
organ system subdivision | 1.11e-07 | 223 |
small intestine | 1.15e-07 | 4 |
intestine | 1.27e-07 | 17 |