FFCP PHASE1:Hg19::chr2:127413481..127413520,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2995 | |EntrezGene=2995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4704 | |HGNC=4704 | ||
|TSSclassifier=strong | |||
|UniProt=P04921 | |UniProt=P04921 | ||
|association_with_transcript=0bp_to_ENST00000259254_5end | |association_with_transcript=0bp_to_ENST00000259254_5end | ||
|cluster_id=chr2:127413481..127413520,+ | |||
|description=CAGE_peak_4_at_GYPC_5end | |description=CAGE_peak_4_at_GYPC_5end | ||
|id=chr2:127413481..127413520,+ | |id=chr2:127413481..127413520,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.94e-13!180;CL:0000048!4.54e-13!430;CL:0000723!8.72e-12!436;CL:0000034!3.02e-11!444;CL:0000057!4.19e-10!75;CL:0002320!3.40e-08!365;CL:0000136!1.25e-07!15;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0000183!1.66e-07!59;CL:0000134!2.64e-07!358;CL:0000187!8.13e-07!54 | |ontology_enrichment_celltype=CL:0000055!3.94e-13!180;CL:0000048!4.54e-13!430;CL:0000723!8.72e-12!436;CL:0000034!3.02e-11!444;CL:0000057!4.19e-10!75;CL:0002320!3.40e-08!365;CL:0000136!1.25e-07!15;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0000183!1.66e-07!59;CL:0000134!2.64e-07!358;CL:0000187!8.13e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.30e-10;13!CL:0000134;1.28e-08;55!CL:0000048;3.95e-07;58!CL:0000723;5.47e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.05e-11,427;CL:0000723,1.19e-10,433;CL:0000034,1.11e-09,441;CL:0000136,2.18e-09,15;CL:0002320,4.01e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.01e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!1.16e-10!167;UBERON:0004290!1.98e-10!70;UBERON:0000914!5.00e-10!83;UBERON:0002329!5.00e-10!83;UBERON:0003077!5.00e-10!83;UBERON:0003059!5.00e-10!83;UBERON:0007282!5.00e-10!83;UBERON:0009618!5.00e-10!83;UBERON:0007285!5.00e-10!83;UBERON:0000926!3.28e-09!448;UBERON:0004120!3.28e-09!448;UBERON:0006603!3.28e-09!448;UBERON:0002385!1.20e-08!63;UBERON:0001015!1.20e-08!63;UBERON:0000383!1.20e-08!63;UBERON:0000468!1.28e-08!659;UBERON:0002384!1.59e-08!375;UBERON:0003081!2.79e-08!216;UBERON:0001134!3.42e-08!61;UBERON:0002036!3.42e-08!61;UBERON:0003082!3.42e-08!61;UBERON:0005256!5.95e-08!143;UBERON:0000486!2.76e-07!82;UBERON:0000479!4.49e-07!787;UBERON:0007100!5.81e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.75e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.09e-14,315;UBERON:0004120,1.09e-14,315;UBERON:0006603,1.09e-14,315;UBERON:0002329,5.69e-09,71;UBERON:0003059,5.69e-09,71;UBERON:0007282,5.69e-09,71;UBERON:0004290,5.69e-09,71;UBERON:0009618,5.69e-09,71;UBERON:0003077,1.12e-08,72;UBERON:0007285,1.12e-08,72;UBERON:0007503,1.53e-08,78;UBERON:0007524,2.17e-08,73;UBERON:0005256,4.88e-08,122;UBERON:0002384,1.05e-07,371;UBERON:0002385,2.53e-07,64;UBERON:0001015,2.53e-07,64;UBERON:0000383,2.53e-07,64;UBERON:0002204,2.67e-07,167;UBERON:0000486,2.76e-07,83;UBERON:0007100,4.09e-07,27;UBERON:0001134,4.53e-07,62;UBERON:0002036,4.53e-07,62;UBERON:0003082,4.53e-07,62;UBERON:0003104,4.77e-07,160;UBERON:0009142,4.77e-07,160 | |||
|phase1_expression=5.08699461957559,5.56661362116556,4.51054093107108,3.00219895059391,2.23480547213644,1.74467704820074,0,3.79031924056099,6.52964070499596,0,0,0.436882744260345,0.527533956456907,1.48519623552056,0.662794751455832,3.36162573225888,2.41077811209591,0,1.95173119516203,0.246242116153576,0.408001382488506,0.940364164434263,0,0.136874425072884,0.251085279189606,1.06978768047132,0.492603536699674,0.393553906568396,0.786728553697808,0.767658796194425,0.77408061658038,0,0.30120591877825,0,0,0,0,0.553995408531877,1.40381113229099,0.651032612147555,1.56740831967947,2.91504299417082,2.31818010870768,0.145398238779565,0,0.727752183563449,1.39457422143411,0.822335776043652,0.619412741790207,1.1507695692886,2.56160706529101,1.18241114944293,1.37898272294647,1.29096936716765,0,2.44715041405386,1.36453075028923,0.449446968890169,2.14258724659632,0.962787081228281,1.91801137739712,0.329851300186716,1.79517291859469,0.426224750532694,5.5139755339431,2.8369261234557,0.622822248995575,2.00998932205395,3.12889751052121,1.08594422352558,1.81619850790011,2.20966581592539,2.21523671208619,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.750884464207532,0.64290234678832,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,4.87613732627923,1.34140171940727,4.09160197899297,2.1686349143074,1.50401373190767,3.62116297402059,1.5905718941022,2.91980922181582,0,0,0,2.61958150995425,0,0,0,0,0.930705723632056,0,0,0,0,0.860234595106124,0,0,0,0,0,0.516833518338658,0,0,0.805658634218294,0.760272105718513,1.95249646038536,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,2.98183171017191,0.633152558322899,0.794455084879313,1.72101972449288,1.06400514659507,1.12135520028461,1.06748995729705,1.2333377420858,1.55605517699883,2.55950276932407,0.163461903113459,2.4217188423189,4.03323147135999,1.64025002283658,4.68240115245481,3.4228309292667,3.73621701379503,0.469737994575059,0.485618833104395,0.140450806702248,1.22492502752936,0.61417158655884,2.9964476540972,1.18800285728205,5.68713937340681,1.82032272387605,17.2468354035897,0.168336113954066,0.750711119231785,0.831192346452549,0.438977620880838,1.5324389789951,3.60571341375832,0.567160915800105,0,2.56268866582281,3.81477422087211,0.300091096084402,1.44273540933814,2.83404594050192,5.21127197728451,0.506328996723799,0.876933046450788,0.252433774244115,2.11714766877288,1.61646056818812,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.414644220061482,0.756962552626885,0,3.12899064659632,3.21620469096443,2.76269842704961,2.78620756819187,5.77503585335668,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,4.41026134156626,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0.469634776943287,3.03169540298255,1.38895653772983,2.47330397904978,0,0,1.72351904261178,1.8720341211139,1.63494278517601,0,0,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0.37872730027914,1.0159663086747,1.90994212779139,0,0,1.54241239054985,0.901029173531752,0.857479297891735,2.5790149399433,2.1798003441664,3.3735611477637,1.16344544182,14.3062578340753,0,5.85063856486715,1.04007436911366,1.28603687131071,0,0.266422179016099,6.57698770827479,4.88359444852299,0,3.58309802723109,5.68627117988073,1.58390374586686,0.904318131178758,0,0.599837947092342,2.43247561282381,2.00902836572851,4.21667878966063,1.4377491329495,1.14861935834114,0,1.59259437334337,1.84928690295345,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,0.813795071099207,2.07970861530807,2.14114786556594,2.52323864054295,2.22568688486155,3.00946099727719,2.27407504055985,3.10419213877515,0,0.184369168541703,2.17209036170207,5.286631251494,1.37257369524342,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0.30239029332968,2.48107807818777,0.61384789315225,1.68396056659844,1.40953064181271,1.02341449813341,1.93024705372329,1.48418066444991,0.462629081407967,1.06537035187876,0.9033987161519,0,0.464841513839837,0,0,0,1.14814448164607,3.82391452814106,3.01586154406675,0.902399225814824,0.15403067420883,0,0,0.527758144464379,1.13733384070897,0.170093705276516,0.431831832204279,1.54227252690289,0.541892875087706,1.50506932156456,0,1.66215201785745,0.447749509444357,0.219259876645935,0,0,0,0,1.75169719801128,0,0,0.574265537996172,0,0,1.64340221096607,0.462145851343933,0.15350367472613,0.413509717453592,1.18162269355101,1.16013355131383,0.340906509664404,0.356128142586949,0,0,0,0.10115778085555,1.39453664789186,0.62962469366128,0.6970372701606,0.924100740528266,1.06461206063404,0,1.66791797193528,1.5743737541619,3.72158369359667,1.58189712359363,2.09693213316207,2.55897791311334,2.56763392820352,1.90921948755562,3.13979456079692,2.15846949099978,1.64722217841633,1.29593642580255,0.404364963146632,0,0,2.43816869544795,0.73114046889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| ||
|short_description=p4@GYPC | |short_description=p4@GYPC | ||
}} | }} |
Latest revision as of 19:36, 16 September 2015
Short description: | p4@GYPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GYPC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000259254_5end |
EntrezGene: | GYPC |
HGNC: | 4704 |
UniProt: | P04921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.05e-11 | 427 |
somatic stem cell | 1.19e-10 | 433 |
stem cell | 1.11e-09 | 441 |
fat cell | 2.18e-09 | 15 |
connective tissue cell | 4.01e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.09e-14 | 315 |
mesoderm-derived structure | 1.09e-14 | 315 |
presumptive mesoderm | 1.09e-14 | 315 |
somite | 5.69e-09 | 71 |
presomitic mesoderm | 5.69e-09 | 71 |
presumptive segmental plate | 5.69e-09 | 71 |
dermomyotome | 5.69e-09 | 71 |
trunk paraxial mesoderm | 5.69e-09 | 71 |
paraxial mesoderm | 1.12e-08 | 72 |
presumptive paraxial mesoderm | 1.12e-08 | 72 |
epithelial vesicle | 1.53e-08 | 78 |
dense mesenchyme tissue | 2.17e-08 | 73 |
trunk mesenchyme | 4.88e-08 | 122 |
connective tissue | 1.05e-07 | 371 |
muscle tissue | 2.53e-07 | 64 |
musculature | 2.53e-07 | 64 |
musculature of body | 2.53e-07 | 64 |
musculoskeletal system | 2.67e-07 | 167 |
multilaminar epithelium | 2.76e-07 | 83 |
primary circulatory organ | 4.09e-07 | 27 |
skeletal muscle tissue | 4.53e-07 | 62 |
striated muscle tissue | 4.53e-07 | 62 |
myotome | 4.53e-07 | 62 |
mesenchyme | 4.77e-07 | 160 |
entire embryonic mesenchyme | 4.77e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.01e-07 | 14 |