FFCP PHASE1:Hg19::chr12:115122262..115122271,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:115122262..115122271,-
|short_description=p7@TBX3
|description=CAGE_peak_7_at_TBX3_5end
|association_with_transcript=-293bp_to_ENST00000349155,ENST0000036...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6926 | |EntrezGene=6926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |HGNC=11602 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIZ8,O15119 | |UniProt=C9JIZ8,O15119 | ||
|association_with_transcript=-293bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |||
|cluster_id=chr12:115122262..115122271,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_7_at_TBX3_5end | |||
|id=chr12:115122262..115122271,- | |||
|ontology_enrichment_celltype=CL:0000057!8.00e-11!75;CL:0000055!4.65e-10!180;CL:0002620!3.31e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002552;7.46e-16;5!CL:0002564;3.52e-09;3!CL:0000197;5.04e-08;6!CL:0000098;5.04e-08;6!CL:0002167;5.04e-08;6!CL:0002602;5.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,7.79e-16,5;CL:0002564,4.09e-09,3;CL:0000197,9.53e-08,6;CL:0000098,9.53e-08,6;CL:0002167,9.53e-08,6;CL:0002602,6.03e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.32e-12!347;UBERON:0000475!4.81e-12!365;UBERON:0005256!1.28e-10!143;UBERON:0000914!8.28e-10!83;UBERON:0002329!8.28e-10!83;UBERON:0003077!8.28e-10!83;UBERON:0003059!8.28e-10!83;UBERON:0007282!8.28e-10!83;UBERON:0009618!8.28e-10!83;UBERON:0007285!8.28e-10!83;UBERON:0003104!1.88e-09!238;UBERON:0009142!1.88e-09!238;UBERON:0003102!2.50e-09!95;UBERON:0000468!9.02e-09!659;UBERON:0002100!1.36e-08!216;UBERON:0000467!6.01e-07!625;UBERON:0004290!6.73e-07!70;UBERON:0000480!7.45e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.66e-14;5!UBERON:0002216;1.66e-14;5!UBERON:0011134;1.66e-14;5!UBERON:0002209;1.66e-14;5!UBERON:0002213;1.66e-14;5!UBERON:0007844;1.66e-14;5!UBERON:0011138;1.66e-14;5!UBERON:0001130;1.66e-14;5!UBERON:0001066;1.66e-14;5!UBERON:0001468;1.66e-14;5!UBERON:0000075;7.35e-14;16!UBERON:0006947;4.76e-11;3!UBERON:0004054;4.76e-11;3!UBERON:0001828;9.20e-10;8!UBERON:0002242;3.52e-09;3!UBERON:0004905;5.97e-09;8!UBERON:0000982;5.97e-09;8!UBERON:0004770;5.97e-09;8!UBERON:0005904;2.30e-08;4!UBERON:0002119;3.09e-07;4!UBERON:0006444;5.24e-07;2!UBERON:0001995;5.24e-07;2!UBERON:0004715;5.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.21e-14,5;UBERON:0002216,2.21e-14,5;UBERON:0011134,2.21e-14,5;UBERON:0002209,2.21e-14,5;UBERON:0002213,2.21e-14,5;UBERON:0005856,2.21e-14,5;UBERON:0005866,2.21e-14,5;UBERON:0005863,2.21e-14,5;UBERON:0007844,2.21e-14,5;UBERON:0011138,2.21e-14,5;UBERON:0001130,2.21e-14,5;UBERON:0001066,2.21e-14,5;UBERON:0001468,2.21e-14,5;UBERON:0000075,6.64e-14,16;UBERON:0006947,4.95e-11,3;UBERON:0004054,4.95e-11,3;UBERON:0011137,6.94e-10,14;UBERON:0001828,9.44e-10,8;UBERON:0002242,4.09e-09,3;UBERON:0003068,4.09e-09,3;UBERON:0002328,4.09e-09,3;UBERON:0004880,4.09e-09,3;UBERON:0004905,7.09e-09,8;UBERON:0000982,7.09e-09,8;UBERON:0004770,7.09e-09,8;UBERON:0005904,2.37e-08,4;UBERON:0000165,2.67e-07,29;UBERON:0000930,2.67e-07,29;UBERON:0002119,3.35e-07,4;UBERON:0006444,6.03e-07,2;UBERON:0001995,6.03e-07,2;UBERON:0004715,6.03e-07,2;UBERON:0003104,8.01e-07,160;UBERON:0009142,8.01e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.982935746006035,0.697801167972428,0.218441372130172,0,2.35156070624089,1.32558950291166,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0.980771418680752,0.151357427644931,0,0,1.5608003841516,0.570471821544449,1.19558944441441,0.23486899728753,0.161872944368132,0.280901613404497,3.26646674007829,2.33385202892359,2.16984140469107,3.56400857184616,1.48360157567134,0,0,3.36672227908132,3.503318556415,1.6623846929051,0.438977620880838,0.30648779579902,0.300476117813194,0,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.412210116953756,0,0.18611685633159,0.337552664482532,0.292311015483596,0.252433774244115,0.276149695926898,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,1.06375246633948,0,0,1.41849132023278,1.5985330740966,0.428933980974443,3.25572963234866,0.823240336780769,0.977208552881205,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,2.85273810081437,0.868687840005475,1.64381058040307,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,1.50051156317903,1.35632511849868,1.24782516918484,1.07057393278297,1.10391690523754,2.45996971484698,0,0,0,0,0.737476674166813,2.5196248195744,0.587403472388222,0,0,0,0.213455115606889,0,1.66435439510497,0,0,0.306923946576125,0.561320188866147,0,0,0,0,1.23367755042124,0.710246901252508,0.9033987161519,0.519254429183621,0.697262270759755,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,1.95777922130672,0.0915694648183434,0.082509499920588,0,0,0,0.773365746336976,0.308097234229289,0.460511024178389,1.10269257987624,0.429680979473094,0.290033387828457,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,1.73986598415015,0.37064843820784,0.572499546967965,0,0,0,2.55897791311334,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0.545999645631943,0,0,0,0,0.876901770507525,1.15755106853338,0,0.202910376962704,0.6196469961995,0.845086807596724,0.430234056612155,0,0,2.48332744849418,0,0,0.75894634753143,0.349934720244983,0,0,0,2.63602642174982,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,1.28236427328014,0,0,0,0,0,0,0.174919999992391,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.692552326534174,0,0,0.179515288819544,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,9.47002566838537,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,4.01871336956669,0,0.290268993867255,0.146178634172371,0.246346371159628,0.193978032976839,0,0.225980740780532,0.137041924646751,0.397429223405979,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0.407992870545287,0.577901179803038,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0.360299883542404,4.65983798109815,0.709048640765013,0.412079291905832,0.337017719270924,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0.242998226632099,0,0.394028536495991,0.577000469484979,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,1.36310417428337,0.339936274560377,0.293104467356165,0,0.258565912723101,0.39669780522807,0,0,0.640724475406168,3.14408610199332,2.48543433208317,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0.785270481251171,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0,0,0.570930667089935,0,0,0.144921028610825,0.447764408660622,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,1.27437413730962,1.34940933649081,0.621051827505038,2.48823724704513,0,2.08698024724694,0,0,0,0.909243296012797,0.644463342254931,0.928067519756987,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,9.75761536334756,0,0,0,3.45039396469382,0,2.29340240203229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| ||
|short_description=p7@TBX3 | |||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p7@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TBX3_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -293bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | C9JIZ8O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 7.79e-16 | 5 |
nucleus pulposus cell of intervertebral disc | 4.09e-09 | 3 |
receptor cell | 9.53e-08 | 6 |
sensory epithelial cell | 9.53e-08 | 6 |
olfactory epithelial cell | 9.53e-08 | 6 |
annulus pulposus cell | 6.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.21e-14 | 5 |
symphysis | 2.21e-14 | 5 |
nonsynovial joint | 2.21e-14 | 5 |
fibrous joint | 2.21e-14 | 5 |
cartilaginous joint | 2.21e-14 | 5 |
developing mesenchymal condensation | 2.21e-14 | 5 |
pre-cartilage condensation | 2.21e-14 | 5 |
cartilaginous condensation | 2.21e-14 | 5 |
cartilage element | 2.21e-14 | 5 |
post-cranial axial skeletal system | 2.21e-14 | 5 |
vertebral column | 2.21e-14 | 5 |
intervertebral disk | 2.21e-14 | 5 |
intervertebral joint | 2.21e-14 | 5 |
subdivision of skeletal system | 6.64e-14 | 16 |
male genital duct | 4.95e-11 | 3 |
internal male genitalia | 4.95e-11 | 3 |
axial skeletal system | 6.94e-10 | 14 |
gingiva | 9.44e-10 | 8 |
nucleus pulposus | 4.09e-09 | 3 |
axial mesoderm | 4.09e-09 | 3 |
notochord | 4.09e-09 | 3 |
chordamesoderm | 4.09e-09 | 3 |
articulation | 7.09e-09 | 8 |
skeletal joint | 7.09e-09 | 8 |
articular system | 7.09e-09 | 8 |
duct of male reproductive system | 2.37e-08 | 4 |
mouth | 2.67e-07 | 29 |
stomodeum | 2.67e-07 | 29 |
left ovary | 3.35e-07 | 4 |
annulus fibrosus | 6.03e-07 | 2 |
fibrocartilage | 6.03e-07 | 2 |
annulus fibrosus disci intervertebralis | 6.03e-07 | 2 |
mesenchyme | 8.01e-07 | 160 |
entire embryonic mesenchyme | 8.01e-07 | 160 |