FFCP PHASE1:Hg19::chr12:133136649..133136682,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:133136649..133136682,+
|short_description=p3@FBRSL1
|description=CAGE_peak_3_at_FBRSL1_5end
|association_with_transcript=16bp_to_ENST00000539264_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57666 | |EntrezGene=57666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29308 | |HGNC=29308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000539264_5end | |||
|cluster_id=chr12:133136649..133136682,+ | |||
|description=CAGE_peak_3_at_FBRSL1_5end | |||
|id=chr12:133136649..133136682,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.10e-37!254;CL:0002321!1.39e-15!248;CL:0000220!7.15e-15!246;CL:0000076!2.40e-11!62;CL:0002076!2.25e-10!43;CL:0000223!5.96e-10!59;CL:0000082!7.04e-08!19;CL:0000221!1.89e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.11e-09;42!CL:0000082;1.72e-08;19!CL:0002319;5.00e-07;25!CL:0002368;7.04e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.69e-38,253;CL:0002321,2.23e-14,250;CL:0002076,9.06e-12,42;CL:0000223,3.93e-11,58;CL:0000076,2.36e-10,63;CL:0000082,2.49e-08,19;CL:0000221,3.43e-07,72;CL:0002319,6.86e-07,25;CL:0002368,7.05e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.58e-33!235;DOID:14566!3.02e-32!239;DOID:0050687!2.01e-23!143;DOID:305!7.64e-20!106;DOID:0050686!7.34e-18!137;DOID:8692!8.93e-13!31;DOID:1240!4.43e-12!39;DOID:2531!3.29e-10!51;DOID:0060083!3.29e-10!51;DOID:3095!7.44e-08!22;DOID:2994!7.44e-08!22;DOID:0050615!4.26e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.16e-13;31!DOID:1240;3.55e-11;39!DOID:3095;6.52e-08;22!DOID:2994;6.52e-08;22!DOID:0050615;1.47e-07;16!DOID:2531;2.71e-07;51!DOID:0060083;2.71e-07;51!DOID:305;3.50e-07;106!DOID:1324;7.48e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.87e-34,235;DOID:14566,5.14e-33,239;DOID:0050687,3.63e-24,143;DOID:305,4.08e-21,106;DOID:0050686,1.20e-19,137;DOID:8692,4.37e-14,31;DOID:1240,2.05e-13,39;DOID:2531,2.64e-11,51;DOID:0060083,2.64e-11,51;DOID:3095,3.57e-08,22;DOID:2994,3.57e-08,22;DOID:0050615,1.88e-07,16;DOID:1324,9.42e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0004802!7.04e-08!19;UBERON:0000115!7.04e-08!19;UBERON:0005177!9.84e-08!107;UBERON:0004119!8.22e-07!169;UBERON:0000925!8.22e-07!169;UBERON:0006595!8.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005911;8.15e-09;36!UBERON:0004807;9.14e-09;22!UBERON:0004802;1.72e-08;19!UBERON:0000115;1.72e-08;19!UBERON:0000490;1.17e-07;33!UBERON:0002048;8.79e-07;22!UBERON:0000117;8.79e-07;22!UBERON:0000171;8.79e-07;22!UBERON:0000170;8.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.47e-09,101;UBERON:0004802,2.49e-08,19;UBERON:0000115,2.49e-08,19;UBERON:0000487,8.55e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,8.10921990454979,29.307649054842,3.05817920982241,3.16520373874144,0.123766352960047,0,0,0,0,1.95173119516203,3.32426856807327,3.87601313364081,3.76145665773705,2.28988789704845,1.91624195102038,4.6450776650077,2.44522898393444,2.95562122019805,2.75487734597877,0,0,0.309632246632152,10.1136334692682,4.819294700452,4.06729411183466,5.57763844178172,6.11327699695913,3.81680571135301,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,1.77901850772711,0,1.60158394814405,1.14950487990897,0.661044872784862,0,1.1384259382189,3.52342313622563,1.52909291250092,1.32171328579026,0,3.68737718685108,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0.795285947051099,0,2.9305793320861,2.66075276955077,4.30390449896318,0.392937226493138,7.65020105414339,6.3033355273353,0,0,0,0,0.571994910780128,1.11437250398869,3.18019851786728,2.58070378531837,6.94281003215189,3.95715559346807,8.80948816040802,6.05259692268148,7.10582886225156,4.39308490587859,2.49036383880697,3.68192674041137,2.41697590265488,2.28081631715554,3.90499292077071,5.14728312484216,4.86085168729056,3.21479021822687,4.26605807989723,3.94140181691628,4.5994991239765,4.74632829784064,6.41206103756425,0,0,6.54141078213801,0,0.633152558322899,1.19168262731897,0.860509862246441,0.709336764396714,0.560677600142307,1.06748995729705,1.72667283892012,1.8672662123986,0.942974704487816,0.326923806226917,0.454072282934794,0,3.28050004567315,0.936480230490962,2.2818872861778,2.54062756938062,2.11382097558777,2.91371299862637,2.10676210053373,1.22492502752936,3.0708579327942,0.929932030581889,0,0.247266929278557,2.73048408581408,0,1.85169725349473,5.88057043398232,1.93944880838928,0,0.30648779579902,0,1.02088964844019,0.358779271377724,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0.257640540045629,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0.484938170456436,0,0.10075209822764,0.169560592310488,2.70565194428616,2.72746120590835,4.87567812161307,10.245791314886,9.93973262411139,12.548945829908,7.04895174104519,7.0649838245176,7.66452454059243,0,0.643240938192885,2.76269842704961,0.464367928031979,0,2.24782920075703,1.34867752062481,2.16909926895134,2.09558548191549,2.61455332910887,1.89816495288877,1.21348177344148,0.588664395376038,1.92373578473195,1.4763109092493,4.20725321410337,1.2347220339942,1.47008711385542,0,0.982827216677626,0,0.441463099414651,5.90344505006945,3.60292401626904,10.4262771138194,8.99214026060957,5.2275065654048,5.46271826435325,1.62904152655162,3.11980435583874,4.3299402607582,3.70977295920246,1.52631302506568,1.15493158208859,0.462985512576611,1.33177906564219,4.74122638775565,5.15091697256924,0,0,0.148631162288728,2.81201501960331,1.00789276919316,2.55195175036296,1.61205340865127,1.45316969256981,6.13412286664338,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.825472625798197,0,0,3.4214489204541,1.7480673759565,0.901029173531752,0.571652865261156,1.90622843387113,5.66748089483264,1.1734125731352,2.19761916788222,3.57656445851882,0,0.531876233169741,1.04007436911366,1.54324424557285,1.41849132023278,3.19706614819319,0.857867961948885,0.542621605391443,2.46972101034231,0.325736184293735,0,3.16780749173372,0.602878754119172,0.871533458600294,0.99972991182057,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,1.02738161275192,0.179060963239896,0,0,0,0.128343036279748,3.04913549066956,14.3153839243384,8.50617694055465,10.0509759200609,8.29320377149112,0,0,0,0.736148950314839,0.500170521059677,2.17012018959788,0.207970861530807,0.356857977594324,0,0.585707074963566,0,0,0,1.32845119707087,1.29058417979192,0.521301686808497,1.95801157462741,2.40200396667599,0,0.215714200818617,0,0.909382714338778,0,1.81434175997808,0.248107807818777,0,0,0,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.410635780069046,1.03850885836724,0,13.8988367030366,3.40860999515584,7.18231713699991,0.34444334449382,0.910455840033585,0.655622074797121,13.9871880001298,4.23584354074281,22.7461433061288,8.76835347919564,2.74434235121477,3.4120015221269,4.25234263191289,0.647747748306418,1.54227252690289,6.23176806350862,10.5354852509519,2.54876273045038,1.66215201785745,8.50724067944278,0.438519753291869,0.261435451024901,4.61610225209501,7.54433685109323,6.18218949862176,0.206082023295445,7.14241825583079,5.94068399428233,12.6338418359158,9.1008434445113,0,5.12354806948246,0.770243085573222,1.22802939780904,1.37836572484531,0.537101224341368,1.0151168573996,1.96021243057032,2.67096106940212,3.8015530533025,4.99694175149276,8.16721359965339,8.09262246844399,0.464845549297286,0.94443704049192,2.0911118104818,1.54016790088044,2.66153015158511,0,1.11194531462352,0,0,0.632758849437452,0.762520775695299,7.16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| ||
|short_description=p3@FBRSL1 | |||
}} | }} |
Latest revision as of 11:01, 17 September 2015
Short description: | p3@FBRSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FBRSL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000539264_5end |
EntrezGene: | FBRSL1 |
HGNC: | 29308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.69e-38 | 253 |
embryonic cell | 2.23e-14 | 250 |
endo-epithelial cell | 9.06e-12 | 42 |
endodermal cell | 3.93e-11 | 58 |
squamous epithelial cell | 2.36e-10 | 63 |
epithelial cell of lung | 2.49e-08 | 19 |
ectodermal cell | 3.43e-07 | 72 |
neural cell | 6.86e-07 | 25 |
respiratory epithelial cell | 7.05e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.47e-09 | 101 |
respiratory tract epithelium | 2.49e-08 | 19 |
lung epithelium | 2.49e-08 | 19 |
simple squamous epithelium | 8.55e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.87e-34 | 235 |
disease of cellular proliferation | 5.14e-33 | 239 |
cell type cancer | 3.63e-24 | 143 |
carcinoma | 4.08e-21 | 106 |
organ system cancer | 1.20e-19 | 137 |
myeloid leukemia | 4.37e-14 | 31 |
leukemia | 2.05e-13 | 39 |
hematologic cancer | 2.64e-11 | 51 |
immune system cancer | 2.64e-11 | 51 |
germ cell and embryonal cancer | 3.57e-08 | 22 |
germ cell cancer | 3.57e-08 | 22 |
respiratory system cancer | 1.88e-07 | 16 |
lung cancer | 9.42e-07 | 15 |