FFCP PHASE1:Hg19::chr3:133292851..133292872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55573 | |EntrezGene=55573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26928 | |HGNC=26928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000431519_5end | |association_with_transcript=31bp_to_ENST00000431519_5end | ||
|cluster_id=chr3:133292851..133292872,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_6_at_CDV3_5end | |description=CAGE_peak_6_at_CDV3_5end | ||
|id=chr3:133292851..133292872,+ | |id=chr3:133292851..133292872,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.41e-14!140;CL:0002057!9.47e-12!42;CL:0002031!3.60e-11!124;CL:0000791!3.96e-11!18;CL:0000789!3.96e-11!18;CL:0002420!3.96e-11!18;CL:0002419!3.96e-11!18;CL:0000790!3.96e-11!18;CL:0000860!4.04e-11!45;CL:0002087!3.08e-10!119;CL:0000766!8.16e-10!76;CL:0000557!1.97e-09!71;CL:0000037!2.10e-08!172;CL:0000566!2.10e-08!172;CL:0000839!5.61e-08!70;CL:0000625!7.84e-08!11;CL:0002009!8.89e-08!65;CL:0000988!1.30e-07!182;CL:0002032!3.18e-07!165;CL:0000837!3.18e-07!165;CL:0002194!4.65e-07!63;CL:0000576!4.65e-07!63;CL:0000040!4.65e-07!63;CL:0000559!4.65e-07!63 | |ontology_enrichment_celltype=CL:0000738!1.41e-14!140;CL:0002057!9.47e-12!42;CL:0002031!3.60e-11!124;CL:0000791!3.96e-11!18;CL:0000789!3.96e-11!18;CL:0002420!3.96e-11!18;CL:0002419!3.96e-11!18;CL:0000790!3.96e-11!18;CL:0000860!4.04e-11!45;CL:0002087!3.08e-10!119;CL:0000766!8.16e-10!76;CL:0000557!1.97e-09!71;CL:0000037!2.10e-08!172;CL:0000566!2.10e-08!172;CL:0000839!5.61e-08!70;CL:0000625!7.84e-08!11;CL:0002009!8.89e-08!65;CL:0000988!1.30e-07!182;CL:0002032!3.18e-07!165;CL:0000837!3.18e-07!165;CL:0002194!4.65e-07!63;CL:0000576!4.65e-07!63;CL:0000040!4.65e-07!63;CL:0000559!4.65e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.51e-11;18!CL:0000789;2.51e-11;18!CL:0002419;2.51e-11;18!CL:0000860;1.95e-10;33!CL:0002057;1.95e-10;33!CL:0000625;5.93e-08;11!CL:0000473;1.44e-07;39!CL:0000234;1.44e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.82e-15,136;CL:0000860,9.39e-12,42;CL:0002057,9.39e-12,42;CL:0002031,2.59e-11,120;CL:0000791,3.92e-11,18;CL:0000789,3.92e-11,18;CL:0002420,3.92e-11,18;CL:0002419,3.92e-11,18;CL:0000790,3.92e-11,18;CL:0002087,2.27e-10,115;CL:0000473,3.81e-10,48;CL:0000234,3.81e-10,48;CL:0000766,4.23e-10,72;CL:0000557,1.07e-09,67;CL:0000037,1.69e-08,168;CL:0000839,3.50e-08,66;CL:0002009,5.34e-08,61;CL:0000625,7.80e-08,11;CL:0000988,8.95e-08,177;CL:0002032,2.64e-07,161;CL:0000837,2.64e-07,161;CL:0002194,2.95e-07,59;CL:0000576,2.95e-07,59;CL:0000040,2.95e-07,59;CL:0000559,2.95e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;2.51e-11;18!CL:0002057;4.57e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.53e-09!102;UBERON:0003061!1.53e-09!102;UBERON:0002193!1.88e-08!112;UBERON:0002371!1.31e-07!80;UBERON:0001474!6.25e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.98e-10,98;UBERON:0003061,9.98e-10,98;UBERON:0002193,1.39e-08,108;UBERON:0002371,8.52e-08,76;UBERON:0004765,1.77e-07,90;UBERON:0001474,4.54e-07,82;UBERON:0001434,5.89e-07,100 | |||
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| ||
|short_description=p6@CDV3 | |short_description=p6@CDV3 | ||
}} | }} |
Latest revision as of 21:17, 24 September 2015
Short description: | p6@CDV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDV3_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 31bp_to_ENST00000431519_5end |
EntrezGene: | CDV3 |
HGNC: | 26928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.82e-15 | 136 |
classical monocyte | 9.39e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.39e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 2.59e-11 | 120 |
mature alpha-beta T cell | 3.92e-11 | 18 |
alpha-beta T cell | 3.92e-11 | 18 |
immature T cell | 3.92e-11 | 18 |
mature T cell | 3.92e-11 | 18 |
immature alpha-beta T cell | 3.92e-11 | 18 |
nongranular leukocyte | 2.27e-10 | 115 |
defensive cell | 3.81e-10 | 48 |
phagocyte | 3.81e-10 | 48 |
myeloid leukocyte | 4.23e-10 | 72 |
granulocyte monocyte progenitor cell | 1.07e-09 | 67 |
hematopoietic stem cell | 1.69e-08 | 168 |
myeloid lineage restricted progenitor cell | 3.50e-08 | 66 |
macrophage dendritic cell progenitor | 5.34e-08 | 61 |
CD8-positive, alpha-beta T cell | 7.80e-08 | 11 |
hematopoietic cell | 8.95e-08 | 177 |
hematopoietic oligopotent progenitor cell | 2.64e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-07 | 161 |
monopoietic cell | 2.95e-07 | 59 |
monocyte | 2.95e-07 | 59 |
monoblast | 2.95e-07 | 59 |
promonocyte | 2.95e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.98e-10 | 98 |
blood island | 9.98e-10 | 98 |
hemolymphoid system | 1.39e-08 | 108 |
bone marrow | 8.52e-08 | 76 |
skeletal element | 1.77e-07 | 90 |
bone element | 4.54e-07 | 82 |
skeletal system | 5.89e-07 | 100 |