FFCP PHASE1:Hg19::chr3:16327923..16327932,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92106 | |EntrezGene=92106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=25128 | |HGNC=25128 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_AL832787_5end | |association_with_transcript=63bp_to_AL832787_5end | ||
|cluster_id=chr3:16327923..16327932,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_7_at_OXNAD1_5end | |description=CAGE_peak_7_at_OXNAD1_5end | ||
|id=chr3:16327923..16327932,+ | |id=chr3:16327923..16327932,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.79e-34!18;CL:0000789!1.79e-34!18;CL:0002420!1.79e-34!18;CL:0002419!1.79e-34!18;CL:0000790!1.79e-34!18;CL:0000084!3.22e-29!25;CL:0000827!3.22e-29!25;CL:0000738!1.73e-28!140;CL:0000625!5.72e-21!11;CL:0000037!3.18e-20!172;CL:0000566!3.18e-20!172;CL:0000838!6.94e-20!52;CL:0000542!2.34e-19!53;CL:0000051!2.34e-19!53;CL:0000988!2.93e-18!182;CL:0002087!1.80e-17!119;CL:0002032!2.11e-17!165;CL:0000837!2.11e-17!165;CL:0002031!9.17e-17!124;CL:0000624!2.27e-13!6;CL:0000094!1.42e-08!8;CL:0000898!1.66e-07!3;CL:0000623!1.66e-07!3;CL:0000825!1.66e-07!3;CL:0000842!2.50e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.79e-34!18;CL:0000789!1.79e-34!18;CL:0002420!1.79e-34!18;CL:0002419!1.79e-34!18;CL:0000790!1.79e-34!18;CL:0000084!3.22e-29!25;CL:0000827!3.22e-29!25;CL:0000738!1.73e-28!140;CL:0000625!5.72e-21!11;CL:0000037!3.18e-20!172;CL:0000566!3.18e-20!172;CL:0000838!6.94e-20!52;CL:0000542!2.34e-19!53;CL:0000051!2.34e-19!53;CL:0000988!2.93e-18!182;CL:0002087!1.80e-17!119;CL:0002032!2.11e-17!165;CL:0000837!2.11e-17!165;CL:0002031!9.17e-17!124;CL:0000624!2.27e-13!6;CL:0000094!1.42e-08!8;CL:0000898!1.66e-07!3;CL:0000623!1.66e-07!3;CL:0000825!1.66e-07!3;CL:0000842!2.50e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.93e-61;18!CL:0000789;2.93e-61;18!CL:0002419;2.93e-61;18!CL:0000084;7.52e-55;25!CL:0000625;1.84e-31;11!CL:0000624;3.38e-28;6!CL:0000542;1.40e-18;53!CL:0000898;5.83e-15;3!CL:0000623;6.25e-15;3!CL:0000226;1.54e-14;3!CL:0000842;1.54e-14;3!CL:0000815;1.42e-10;2!CL:0000792;1.42e-10;2!CL:0002677;1.42e-10;2!CL:0002087;9.30e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.34e-61,18;CL:0000789,1.34e-61,18;CL:0002420,1.34e-61,18;CL:0002419,1.34e-61,18;CL:0000790,1.34e-61,18;CL:0000084,4.35e-55,25;CL:0000827,4.35e-55,25;CL:0000838,5.40e-34,52;CL:0000542,2.95e-33,53;CL:0000051,2.95e-33,53;CL:0000625,9.90e-32,11;CL:0000624,3.63e-28,6;CL:0000738,4.42e-23,136;CL:0002087,1.33e-20,115;CL:0000037,2.07e-17,168;CL:0000988,3.48e-16,177;CL:0000898,5.97e-15,3;CL:0000623,5.97e-15,3;CL:0000825,5.97e-15,3;CL:0002031,1.45e-14,120;CL:0000226,1.50e-14,3;CL:0000842,1.50e-14,3;CL:0002032,3.56e-14,161;CL:0000837,3.56e-14,161;CL:0000815,1.39e-10,2;CL:0000792,1.39e-10,2;CL:0002677,1.39e-10,2;CL:0000893,4.84e-10,2;CL:0002489,4.84e-10,2;CL:0000809,4.84e-10,2;CL:0000808,4.84e-10,2;CL:0000894,4.84e-10,2;CL:0000806,4.84e-10,2;CL:0000807,4.84e-10,2;CL:0000805,4.84e-10,2;CL:0002425,4.84e-10,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.93e-61;18!CL:0000051;1.40e-18;53!CL:0002425;5.55e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.72e-10!102;UBERON:0003061!2.72e-10!102;UBERON:0002193!1.90e-09!112;UBERON:0000178!2.46e-09!15;UBERON:0000179!2.46e-09!15;UBERON:0000463!2.46e-09!15;UBERON:0004177!9.38e-09!7;UBERON:0002370!1.04e-07!4;UBERON:0005058!1.04e-07!4;UBERON:0009113!1.04e-07!4;UBERON:0003295!1.04e-07!4;UBERON:0005562!1.04e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.58e-07;15!UBERON:0000179;2.58e-07;15!UBERON:0000463;2.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.80e-07,15;UBERON:0000179,2.80e-07,15;UBERON:0000463,2.80e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,2.36018566109342,1.15148819429164,0.464448369948228,0,0,0,0,0,0,2.76997704265939,1.80490002723128,0.868043482863407,0,0.32389366601898,0,0.145398238779565,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,5.11445402295966,6.28817220398664,13.1584959359686,0.167186495390678,10.1035902656413,16.0972253949809,0,0.445641827540694,5.89211814949674,8.4182879941776,0.541607727530031,1.0247305578054,0.130059347559878,1.15106533222573,1.10540007114339,0.289803085735052,5.33831627383417,12.5744189202165,3.1360657141493,1.35971211237079,6.13152789763074,6.8725489096526,2.27717722817553,0.318565414324097,3.90650072313851,2.85135613334512,0.301150238155546,1.79181255616186,1.24930726552346,1.89421801635213,1.64225599384209,10.2819439044614,7.75576567772171,6.08262496307756,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,8.27529192848094,7.97822026980214,4.62034930607094,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,3.66714141391649,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30725423917463,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.398594520940089,0.817826971279221,0,0,0,4.19973531295353,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0.217716747896961,0,0.80822463617505,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,2.36018566109342,1.15148819429164,0.464448369948228,0,0,0,0,0,0,2.76997704265939,1.80490002723128,0.868043482863407,0,0.32389366601898,0,0.145398238779565,0,0,0.464858073811369,0,0,0.28769239232215,0,0,0.689491361473237,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,5.11445402295966,6.28817220398664,13.1584959359686,0.167186495390678,10.1035902656413,16.0972253949809,0,0.445641827540694,5.89211814949674,8.4182879941776,0.541607727530031,1.0247305578054,0.130059347559878,1.15106533222573,1.10540007114339,0.289803085735052,5.33831627383417,12.5744189202165,3.1360657141493,1.35971211237079,6.13152789763074,6.8725489096526,2.27717722817553,0.318565414324097,3.90650072313851,2.85135613334512,0.301150238155546,1.79181255616186,1.24930726552346,1.89421801635213,1.64225599384209,10.2819439044614,7.75576567772171,6.08262496307756,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68127715990291,8.27529192848094,7.97822026980214,4.62034930607094,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,3.66714141391649,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30725423917463,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55888247071511,0.398594520940089,0.817826971279221,0,0,0,4.19973531295353,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0.217716747896961,0,0.80822463617505,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p7@OXNAD1 | |short_description=p7@OXNAD1 | ||
}} | }} |
Latest revision as of 12:04, 16 September 2015
Short description: | p7@OXNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_OXNAD1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 63bp_to_AL832787_5end |
EntrezGene: | OXNAD1 |
HGNC: | 25128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.80e-07 | 15 |
haemolymphatic fluid | 2.80e-07 | 15 |
organism substance | 2.80e-07 | 15 |