FFCP PHASE1:Hg19::chr12:47474769..47474830,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:47474769..47474830,-
|short_description=p@chr12:47474769..47474830,-
|description=CAGE_peak_at_chr12:47474769..47474830,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:47474769..47474830,- | |||
|description=CAGE_peak_at_chr12:47474769..47474830,- | |||
|id=chr12:47474769..47474830,- | |||
|ontology_enrichment_celltype=CL:0000055!4.63e-09!180;CL:0000359!5.44e-09!32;CL:0000192!2.47e-07!42;CL:0000514!2.47e-07!42;CL:0000220!5.77e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.86e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,8.62e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!4.01e-09!29;DOID:120!4.67e-09!27;DOID:2394!1.00e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.07e-17;14!DOID:193;9.54e-16;29!DOID:120;3.79e-15;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.64e-17,14;DOID:193,1.10e-15,29;DOID:120,4.23e-15,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.72e-09!42;UBERON:0003509!3.72e-09!42;UBERON:0004572!3.72e-09!42;UBERON:0000475!3.40e-08!365;UBERON:0003914!5.83e-08!118;UBERON:0002100!1.07e-07!216;UBERON:0004573!2.74e-07!33;UBERON:0004571!2.74e-07!33;UBERON:0001981!2.76e-07!60;UBERON:0007500!2.76e-07!60;UBERON:0004537!2.76e-07!60;UBERON:0006965!2.76e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.64e-10;13!UBERON:0002118;1.32e-09;5!UBERON:0003134;9.54e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.36e-10,13;UBERON:0002118,1.24e-09,5;UBERON:0002323,1.40e-09,46;UBERON:0003886,2.45e-09,54;UBERON:0004458,1.13e-08,49;UBERON:0002553,1.28e-07,61;UBERON:0003134,4.71e-07,37;UBERON:0000474,4.71e-07,37 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,4.00293193412522,0,0.872338524100369,0,0,0,0.982935746006035,0,0,0,0,0,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0.436094052142534,1.49091585508596,0.12663051166458,1.72131935057184,1.14734648299525,0.709336764396714,0,1.06748995729705,1.72667283892012,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0.213557388818567,0.635795703478686,3.00091096084402,0.412210116953756,7.21393512127762,1.8611685633159,1.0126579934476,1.65642908774038,3.02920529092937,1.01254888506529,0,4.9701342952326,1.91428986632517,0.169560592310488,0.966304265816484,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,1.34385702559088,1.13420077793909,0.358234090811393,0.290633938513962,0.383382679165211,1.47798971368783,0,0.829312462163088,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,8.66120495577111,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,2.1100756394171,6.10073421020206,7.19805536510811,0,0,0,0.718874566474748,0,8.5582143024431,0,0,0.537182889719687,0,0,0,0,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21243002250044,0,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,0.841980283299221,0.128139149255701,2.55853624533352,9.16867350518563,0,0.308419387605311,0.177561725313127,0,1.03850885836724,0.116210378459959,0,4.21063587636898,0.644566922551274,0.918515585316854,0.364182336013434,0.393373244878272,1.80479845162965,1.5403067420883,0,0,1.16106791782163,0,0,2.80690690932781,1.54227252690289,0,0,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,2.49847087574638,2.67986696238627,0.30347334256665,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,3.43499728180779,0,0,0.190630193923825,0,0,0.318203247925937,3.13979456079692,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0.421258456238981,0,0.731140468893853,2.11300293513511,1.36499911407986,0.282810863907425,1.13008116620243,1.65409603063837,2.65375590096488,0.438450885253763,0,0,3.44947640836597,0.30982349809975,4.50712964051586,1.57752487424457,0.294747123039363,2.1400263088875,0,0,0,0,0,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,3.36942951335251,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0.79312517629427,5.76849984088355,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,2.19172787076177,0,0,10.1245995677133,0,0,1.25815691606258,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0.7812832832557,0,0,0.341380344856499,0.762760950878299,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.48124672601102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31723098165748,3.64091151463049,3.45326210247948,4.77889719091835,2.27687636823834,0,1.04135843001079,2.6457947301882,0.870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0,1.35588444468319,6.9891381569843,0.794858446811959,0.0633107959558787,0.195551382734803,2.40476460754601,0.426905989478705,0,0.432271251462318,0,0,0.14405479798815,0.869767748958028,1.17847017308398,6.65930609760709,3.87030531355633,0.611989305817931,0.866851769704557,0,0.136905378891993,0,5.15718529703949,0,0.279282401272254,0.458320848023367,0,0,0,0,0,59.0891809009542,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0,4.2221343410278,0,0,0,0,1.72844298240254,0.653174720218818,5.98650957812437,0.246277562248017,2.72620834856675,0.453248366080503,0.146552233678082,0,0.517131825446202,0.26446520348538,0.171086837884329,1.40963004463334,0.213574825135389,0,0,0,0,0,8.29843635101236,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,1.99968652739371,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0.686520205190771,0,0.466311601748341,0.887130899937803,6.8497609880392,2.69881867298163,2.32894435314389,0,6.38020114939188,1.5652351854352,9.16571414883032,5.71207818253193,5.2893195316606,2.54588122883583,3.65195893944461,6.96050639817741,5.57334244178062,0.400027764663154,0,0,0,0.770479321629213,0.214441591374926,0,4.53411851024545,2.31522474323834,1.71315693154527,0.179088841081487,0,1.31570429747224,1.06013487567529,2.12205442098006,0,0.512483037175893,0,1.21543982470953,0.138258436151731,0,0,0,0.655219697692825,0.737318726261158,4.01493034381391,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.490738592505128,0.471878893390961,0.183428598521679,0.462102664601353,9.91593448214635,2.7614397042404,0,0.150420656698515,14.1193548092464,0,0,0,4.28782650029431,0,0,0,0.0634158101939068,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0,0,0.778619813244484,0.313972371402056,0.157115589916002,0,0,0,0.47775168788705,1.92986669276972,0,0.23248285073625,0,1.60342272946051,0,0,0,0,0.828324005113957,0.426067023795788,0,2.06196181689645,0.62041277132864,2.8666168169323,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,5.88355972209373,1.17838273550813,0,0.297046400327086,0,6.11737612876141,0.0939839179798536,0,0,0,0.352894871715692,0.481448200135009,0.730336388246517,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26805168304504,0.106727345877715,0,3.86248369058324,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.363356758541113,0,0.140954404095971,4.00293193412522,0,0.872338524100369,0,0,0,0.982935746006035,0,0,0,0,0,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0.246242116153576,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0.436094052142534,1.49091585508596,0.12663051166458,1.72131935057184,1.14734648299525,0.709336764396714,0,1.06748995729705,1.72667283892012,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0.340296549480063,0.717558542755448,0.213557388818567,0.635795703478686,3.00091096084402,0.412210116953756,7.21393512127762,1.8611685633159,1.0126579934476,1.65642908774038,3.02920529092937,1.01254888506529,0,4.9701342952326,1.91428986632517,0.169560592310488,0.966304265816484,0.272746120590835,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,1.09750285408626,0,0,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,1.34385702559088,1.13420077793909,0.358234090811393,0.290633938513962,0.383382679165211,1.47798971368783,0,0.829312462163088,0.576479813667846,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0,8.66120495577111,0,0,0,0,0,0,0,0,0,0,0,0,1.58390374586686,2.1100756394171,6.10073421020206,7.19805536510811,0,0,0,0.718874566474748,0,8.5582143024431,0,0,0.537182889719687,0,0,0,0,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21243002250044,0,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,0.841980283299221,0.128139149255701,2.55853624533352,9.16867350518563,0,0.308419387605311,0.177561725313127,0,1.03850885836724,0.116210378459959,0,4.21063587636898,0.644566922551274,0.918515585316854,0.364182336013434,0.393373244878272,1.80479845162965,1.5403067420883,0,0,1.16106791782163,0,0,2.80690690932781,1.54227252690289,0,0,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,2.49847087574638,2.67986696238627,0.30347334256665,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0,3.43499728180779,0,0,0.190630193923825,0,0,0.318203247925937,3.13979456079692,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0.421258456238981,0,0.731140468893853,2.11300293513511,1.36499911407986,0.282810863907425,1.13008116620243,1.65409603063837,2.65375590096488,0.438450885253763,0,0,3.44947640836597,0.30982349809975,4.50712964051586,1.57752487424457,0.294747123039363,2.1400263088875,0,0,0,0,0,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,3.36942951335251,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0.79312517629427,5.76849984088355,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,2.19172787076177,0,0,10.1245995677133,0,0,1.25815691606258,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0.7812832832557,0,0,0.341380344856499,0.762760950878299,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,1.48124672601102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.31723098165748,3.64091151463049,3.45326210247948,4.77889719091835,2.27687636823834,0,1.04135843001079,2.6457947301882,0.870592065804026,0,0,0,0.146178634172371,0.0821154570532092,0.0969890164884194,0,1.35588444468319,6.9891381569843,0.794858446811959,0.0633107959558787,0.195551382734803,2.40476460754601,0.426905989478705,0,0.432271251462318,0,0,0.14405479798815,0.869767748958028,1.17847017308398,6.65930609760709,3.87030531355633,0.611989305817931,0.866851769704557,0,0.136905378891993,0,5.15718529703949,0,0.279282401272254,0.458320848023367,0,0,0,0,0,59.0891809009542,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0.105600336519406,0,4.2221343410278,0,0,0,0,1.72844298240254,0.653174720218818,5.98650957812437,0.246277562248017,2.72620834856675,0.453248366080503,0.146552233678082,0,0.517131825446202,0.26446520348538,0.171086837884329,1.40963004463334,0.213574825135389,0,0,0,0,0,8.29843635101236,0.544017803369474,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.0620964029413835,0,1.99968652739371,0,0,2.35265819698172,0,0,0,0,0,0,0,0,0.686520205190771,0,0.466311601748341,0.887130899937803,6.8497609880392,2.69881867298163,2.32894435314389,0,6.38020114939188,1.5652351854352,9.16571414883032,5.71207818253193,5.2893195316606,2.54588122883583,3.65195893944461,6.96050639817741,5.57334244178062,0.400027764663154,0,0,0,0.770479321629213,0.214441591374926,0,4.53411851024545,2.31522474323834,1.71315693154527,0.179088841081487,0,1.31570429747224,1.06013487567529,2.12205442098006,0,0.512483037175893,0,1.21543982470953,0.138258436151731,0,0,0,0.655219697692825,0.737318726261158,4.01493034381391,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.490738592505128,0.471878893390961,0.183428598521679,0.462102664601353,9.91593448214635,2.7614397042404,0,0.150420656698515,14.1193548092464,0,0,0,4.28782650029431,0,0,0,0.0634158101939068,0,0,0,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.0679697329768317,0,0,0.778619813244484,0.313972371402056,0.157115589916002,0,0,0,0.47775168788705,1.92986669276972,0,0.23248285073625,0,1.60342272946051,0,0,0,0,0.828324005113957,0.426067023795788,0,2.06196181689645,0.62041277132864,2.8666168169323,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.0771741581079447,0.218559560503957,0,5.88355972209373,1.17838273550813,0,0.297046400327086,0,6.11737612876141,0.0939839179798536,0,0,0,0.352894871715692,0.481448200135009,0.730336388246517,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26805168304504,0.106727345877715,0,3.86248369058324,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr12:47474769..47474830,- | |||
}} | }} |
Latest revision as of 08:44, 24 July 2015
Short description: | p@chr12:47474769..47474830, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47474769..47474830, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.62e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.36e-10 | 13 |
right ovary | 1.24e-09 | 5 |
body cavity | 1.40e-09 | 46 |
body cavity precursor | 2.45e-09 | 54 |
body cavity or lining | 1.13e-08 | 49 |
anatomical cavity | 1.28e-07 | 61 |
female reproductive organ | 4.71e-07 | 37 |
female reproductive system | 4.71e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.64e-17 | 14 |
reproductive organ cancer | 1.10e-15 | 29 |
female reproductive organ cancer | 4.23e-15 | 27 |