FFCP PHASE1:Hg19::chr12:54430878..54430894,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54430878..54430894,+
|short_description=p@chr12:54430878..54430894,+
|description=CAGE_peak_at_chr12:54430878..54430894,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:54430878..54430894,+ | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_at_chr12:54430878..54430894,+ | |||
|id=chr12:54430878..54430894,+ | |||
|ontology_enrichment_celltype=CL:0000214!3.21e-12!3;CL:0002580!4.32e-12!3;CL:0002564!9.75e-12!3;CL:0002602!1.67e-08!2;CL:0002334!2.38e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.54e-29;1!CL:0000159;1.66e-15;2!CL:0000214;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.78e-29,1;CL:0000159,1.78e-15,2;CL:0000214,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.74e-12;10!UBERON:0007687;2.74e-12;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;7.48e-30;1!DOID:2152;1.54e-29;1!DOID:74;1.15e-15;2!DOID:1287;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.48e-30,1;DOID:2152,1.78e-29,1;DOID:74,1.15e-15,2;DOID:1287,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0004905!5.31e-19!5;UBERON:0000982!5.31e-19!5;UBERON:0004770!5.31e-19!5;UBERON:0006915!3.21e-12!3;UBERON:0002018!3.21e-12!3;UBERON:0002217!3.21e-12!3;UBERON:0007616!3.21e-12!3;UBERON:0002242!9.75e-12!3;UBERON:0003068!9.75e-12!3;UBERON:0002328!9.75e-12!3;UBERON:0004880!9.75e-12!3;UBERON:0009568!1.67e-08!2;UBERON:0002216!1.67e-08!2;UBERON:0002209!1.67e-08!2;UBERON:0002213!1.67e-08!2;UBERON:0004267!1.67e-08!2;UBERON:0006444!1.67e-08!2;UBERON:0001995!1.67e-08!2;UBERON:0004715!1.67e-08!2;UBERON:0001468!1.67e-08!2;UBERON:0001130!1.67e-08!2;UBERON:0001066!1.67e-08!2;UBERON:0000489!6.31e-08!32;UBERON:0002298!9.90e-08!8;UBERON:0002113!1.27e-07!27;UBERON:0003918!1.27e-07!27;UBERON:0005095!1.27e-07!27;UBERON:0007687!1.27e-07!27;UBERON:0005174!2.03e-07!5;UBERON:0001137!2.03e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.54e-29;1!UBERON:0002426;3.16e-29;1!UBERON:0003831;3.16e-29;1!UBERON:0003898;3.16e-29;1!UBERON:0004830;3.16e-29;1!UBERON:0003830;3.16e-29;1!UBERON:0005175;3.16e-29;1!UBERON:0001774;3.16e-29;1!UBERON:0001103;3.16e-29;1!UBERON:0004909;1.66e-15;2!UBERON:0005090;2.37e-15;2!UBERON:0001630;2.37e-15;2!UBERON:0000988;7.42e-11;3!UBERON:0006915;1.09e-10;3!UBERON:0007616;1.09e-10;3!UBERON:0002217;1.09e-10;3!UBERON:0002018;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.78e-29,1;UBERON:0002426,3.16e-29,1;UBERON:0003831,3.16e-29,1;UBERON:0003898,3.16e-29,1;UBERON:0004830,3.16e-29,1;UBERON:0003830,3.16e-29,1;UBERON:0005175,3.16e-29,1;UBERON:0001774,3.16e-29,1;UBERON:0001103,3.16e-29,1;UBERON:0010084,3.16e-29,1;UBERON:0004909,1.78e-15,2;UBERON:0005090,2.37e-15,2;UBERON:0001630,2.37e-15,2;UBERON:0000988,7.42e-11,3;UBERON:0006915,9.90e-11,3;UBERON:0007616,9.90e-11,3;UBERON:0002217,9.90e-11,3;UBERON:0002018,9.90e-11,3 | |||
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| ||
|short_description=p@chr12:54430878..54430894,+ | |||
}} | }} |
Latest revision as of 09:58, 24 July 2015
Short description: | p@chr12:54430878..54430894, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54430878..54430894, + |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.78e-29 | 1 |
seromucus secreting cell | 1.78e-15 | 2 |
synovial cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.78e-29 | 1 |
chest muscle | 3.16e-29 | 1 |
respiratory system muscle | 3.16e-29 | 1 |
skeletal muscle of trunk | 3.16e-29 | 1 |
respiratory system skeletal muscle | 3.16e-29 | 1 |
thoracic segment muscle | 3.16e-29 | 1 |
chest organ | 3.16e-29 | 1 |
muscle of trunk | 3.16e-29 | 1 |
diaphragm | 3.16e-29 | 1 |
future diaphragm | 3.16e-29 | 1 |
epithelium of gonad | 1.78e-15 | 2 |
muscle structure | 2.37e-15 | 2 |
muscle organ | 2.37e-15 | 2 |
pons | 7.42e-11 | 3 |
stratified squamous epithelium | 9.90e-11 | 3 |
layer of synovial tissue | 9.90e-11 | 3 |
synovial joint | 9.90e-11 | 3 |
synovial membrane of synovial joint | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.48e-30 | 1 |
ovary epithelial cancer | 1.78e-29 | 1 |
hematopoietic system disease | 1.15e-15 | 2 |
cardiovascular system disease | 1.70e-08 | 4 |