FFCP PHASE1:Hg19::chr1:183441618..183441657,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9887 | |EntrezGene=9887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16792 | |HGNC=16792 | ||
|TSSclassifier=strong | |||
|UniProt=Q92540,B1ALB4,E9PBK2,E9PEH2,D6RAD0,E9PCI0 | |UniProt=Q92540,B1ALB4,E9PBK2,E9PEH2,D6RAD0,E9PCI0 | ||
|association_with_transcript=0bp_to_ENST00000347615,ENST00000419169,ENST00000444547,ENST00000507469,ENST00000507691,ENST00000508461,uc001gqf.2,uc001gqg.2,uc001gqh.2,uc001gqi.2,uc010pob.1,uc010poc.1_5end | |association_with_transcript=0bp_to_ENST00000347615,ENST00000419169,ENST00000444547,ENST00000507469,ENST00000507691,ENST00000508461,uc001gqf.2,uc001gqg.2,uc001gqh.2,uc001gqi.2,uc010pob.1,uc010poc.1_5end | ||
|cluster_id=chr1:183441618..183441657,+ | |||
|description=CAGE_peak_1_at_SMG7_5end | |description=CAGE_peak_1_at_SMG7_5end | ||
|id=chr1:183441618..183441657,+ | |id=chr1:183441618..183441657,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.83e-13!235;DOID:14566!9.17e-12!239;DOID:0050687!1.49e-08!143;DOID:0050686!6.15e-08!137;DOID:305!9.06e-08!106 | |ontology_enrichment_disease=DOID:162!4.83e-13!235;DOID:14566!9.17e-12!239;DOID:0050687!1.49e-08!143;DOID:0050686!6.15e-08!137;DOID:305!9.06e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.83e-13,235;DOID:14566,9.17e-12,239;DOID:0050687,1.49e-08,143;DOID:0050686,6.15e-08,137;DOID:305,9.06e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-09!115;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0004121!2.72e-07!169;UBERON:0001017!2.75e-07!82;UBERON:0000924!4.61e-07!173;UBERON:0006601!4.61e-07!173;UBERON:0000955!4.70e-07!69;UBERON:0006238!4.70e-07!69;UBERON:0002780!8.39e-07!41;UBERON:0001890!8.39e-07!41;UBERON:0006240!8.39e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!1.23e-09!115;UBERON:0000073!1.32e-07!94;UBERON:0001016!1.32e-07!94;UBERON:0004121!2.72e-07!169;UBERON:0001017!2.75e-07!82;UBERON:0000924!4.61e-07!173;UBERON:0006601!4.61e-07!173;UBERON:0000955!4.70e-07!69;UBERON:0006238!4.70e-07!69;UBERON:0002780!8.39e-07!41;UBERON:0001890!8.39e-07!41;UBERON:0006240!8.39e-07!41 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.00e-09,114;UBERON:0011216,5.78e-09,223;UBERON:0001016,1.05e-08,89;UBERON:0001017,2.52e-07,81;UBERON:0000955,4.23e-07,68;UBERON:0006238,4.23e-07,68;UBERON:0002780,8.39e-07,41;UBERON:0001890,8.39e-07,41;UBERON:0003080,8.39e-07,41;UBERON:0006240,8.39e-07,41 | |||
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| ||
|short_description=p1@SMG7 | |short_description=p1@SMG7 | ||
}} | }} |
Latest revision as of 03:21, 19 September 2015
Short description: | p1@SMG7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMG7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347615, ENST00000419169, ENST00000444547, ENST00000507469, ENST00000507691, ENST00000508461, uc001gqf.2, uc001gqg.2, uc001gqh.2, uc001gqi.2, uc010pob.1, uc010poc.1_5end |
EntrezGene: | SMG7 |
HGNC: | 16792 |
UniProt: | Q92540B1ALB4E9PBK2E9PEH2D6RAD0E9PCI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.00e-09 | 114 |
organ system subdivision | 5.78e-09 | 223 |
nervous system | 1.05e-08 | 89 |
central nervous system | 2.52e-07 | 81 |
brain | 4.23e-07 | 68 |
future brain | 4.23e-07 | 68 |
regional part of forebrain | 8.39e-07 | 41 |
forebrain | 8.39e-07 | 41 |
anterior neural tube | 8.39e-07 | 41 |
future forebrain | 8.39e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.83e-13 | 235 |
disease of cellular proliferation | 9.17e-12 | 239 |
cell type cancer | 1.49e-08 | 143 |
organ system cancer | 6.15e-08 | 137 |
carcinoma | 9.06e-08 | 106 |