FFCP PHASE1:Hg19::chr12:57629234..57629249,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:57629234..57629249,-
|short_description=p@chr12:57629234..57629249,-
|description=CAGE_peak_at_chr12:57629234..57629249,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:57629234..57629249,- | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_at_chr12:57629234..57629249,- | |||
|id=chr12:57629234..57629249,- | |||
|ontology_enrichment_celltype=CL:0000153!4.39e-16!9;CL:0000447!4.39e-16!9;CL:0000667!2.41e-10!6;CL:0000058!2.41e-10!6;CL:0000138!2.41e-10!6;CL:0000327!1.06e-09!14;CL:0000214!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.23e-63;9!CL:0000447;2.23e-63;9!CL:0000138;4.11e-49;6!CL:0000327;7.02e-38;15!CL:0000499;4.53e-20;28!CL:0000214;1.17e-16;3!CL:0000151;1.41e-12;36!CL:0002569;9.26e-09;6!CL:0002575;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.57e-63,9;CL:0000447,2.57e-63,9;CL:0000058,4.78e-49,6;CL:0000138,4.78e-49,6;CL:0000327,7.64e-38,15;CL:0000499,4.74e-20,28;CL:0000214,1.17e-16,3;CL:0000151,1.80e-15,36;CL:0002569,1.00e-08,6;CL:0002575,4.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.54e-10!12;UBERON:0000042!3.54e-10!12;UBERON:0006915!1.76e-07!3;UBERON:0002018!1.76e-07!3;UBERON:0002217!1.76e-07!3;UBERON:0007616!1.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.17e-16;3!UBERON:0007616;1.17e-16;3!UBERON:0002217;1.17e-16;3!UBERON:0002018;1.17e-16;3!UBERON:0003422;9.26e-09;6!UBERON:0003104;1.25e-07;7!UBERON:0009142;1.25e-07;7!UBERON:0004905;8.35e-07;8!UBERON:0000982;8.35e-07;8!UBERON:0004770;8.35e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.17e-16,3;UBERON:0007616,1.17e-16,3;UBERON:0002217,1.17e-16,3;UBERON:0002018,1.17e-16,3;UBERON:0003422,1.00e-08,6;UBERON:0004905,8.35e-07,8;UBERON:0000982,8.35e-07,8;UBERON:0004770,8.35e-07,8 | |||
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| ||
|short_description=p@chr12:57629234..57629249,- | |||
}} | }} |
Latest revision as of 10:41, 24 July 2015
Short description: | p@chr12:57629234..57629249, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57629234..57629249, - |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.57e-63 | 9 |
carbohydrate secreting cell | 2.57e-63 | 9 |
chondroblast | 4.78e-49 | 6 |
chondrocyte | 4.78e-49 | 6 |
extracellular matrix secreting cell | 7.64e-38 | 15 |
stromal cell | 4.74e-20 | 28 |
synovial cell | 1.17e-16 | 3 |
secretory cell | 1.80e-15 | 36 |
mesenchymal stem cell of umbilical cord | 1.00e-08 | 6 |
central nervous system pericyte | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.17e-16 | 3 |
layer of synovial tissue | 1.17e-16 | 3 |
synovial joint | 1.17e-16 | 3 |
synovial membrane of synovial joint | 1.17e-16 | 3 |
mesenchyme of umbilical cord | 1.00e-08 | 6 |
articulation | 8.35e-07 | 8 |
skeletal joint | 8.35e-07 | 8 |
articular system | 8.35e-07 | 8 |