FFCP PHASE1:Hg19::chr1:203148612..203148623,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_uc001gzl.3_5end | |association_with_transcript=-1bp_to_uc001gzl.3_5end | ||
|cluster_id=chr1:203148612..203148623,- | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_12_at_CHI3L1_5end | |description=CAGE_peak_12_at_CHI3L1_5end | ||
|id=chr1:203148612..203148623,- | |id=chr1:203148612..203148623,- | ||
|ontology_enrichment_celltype=CL:0000153!9.39e-15!9;CL:0000447!9.39e-15!9;CL:0000667!6.84e-12!6;CL:0000058!6.84e-12!6;CL:0000138!6.84e-12!6;CL:0000135!4.24e-09!3;CL:0000386!4.24e-09!3;CL:0000388!4.24e-09!3;CL:0000327!5.03e-09!14;CL:0000499!2.10e-08!27;CL:0000235!9.42e-07!10 | |ontology_enrichment_celltype=CL:0000153!9.39e-15!9;CL:0000447!9.39e-15!9;CL:0000667!6.84e-12!6;CL:0000058!6.84e-12!6;CL:0000138!6.84e-12!6;CL:0000135!4.24e-09!3;CL:0000386!4.24e-09!3;CL:0000388!4.24e-09!3;CL:0000327!5.03e-09!14;CL:0000499!2.10e-08!27;CL:0000235!9.42e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.57e-45;9!CL:0000447;8.57e-45;9!CL:0000138;5.66e-35;6!CL:0000327;1.25e-26;15!CL:0000499;5.49e-23;28!CL:0000235;2.64e-22;6!CL:0002540;5.52e-13;6!CL:0000135;2.54e-12;3!CL:0000388;2.54e-12;3!CL:0000214;4.85e-12;3!CL:0000151;9.32e-09;36!CL:0002092;5.38e-08;10!CL:0000182;7.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.31e-44,9;CL:0000447,1.31e-44,9;CL:0000058,8.04e-35,6;CL:0000138,8.04e-35,6;CL:0000327,1.61e-26,15;CL:0000499,6.18e-23,28;CL:0000235,2.72e-22,6;CL:0002540,4.49e-13,6;CL:0000135,2.27e-12,3;CL:0000388,2.27e-12,3;CL:0000214,5.28e-12,3;CL:0000151,1.25e-10,36;CL:0002092,4.76e-08,10;CL:0000134,7.70e-08,354;CL:0002320,1.29e-07,361;CL:0000182,7.48e-07,12;CL:0000219,8.00e-07,386 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.08e-09;1!UBERON:0004161;1.98e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;6.59e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.31e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!4.24e-09!3;UBERON:0002298!4.21e-07!8 | |ontology_enrichment_uberon=UBERON:0000043!4.24e-09!3;UBERON:0002298!4.21e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.54e-12;3!UBERON:0000043;2.54e-12;3!UBERON:0007845;2.54e-12;3!UBERON:0006915;4.85e-12;3!UBERON:0007616;4.85e-12;3!UBERON:0002217;4.85e-12;3!UBERON:0002018;4.85e-12;3!UBERON:0001282;1.25e-09;1!UBERON:0009842;1.25e-09;1!UBERON:0003704;1.25e-09;1!UBERON:0001171;1.25e-09;1!UBERON:0001172;1.25e-09;1!UBERON:0002363;2.08e-09;1!UBERON:0002107;2.83e-07;19!UBERON:0006925;2.83e-07;19!UBERON:0002371;9.71e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.27e-12,3;UBERON:0000043,2.27e-12,3;UBERON:0007845,2.27e-12,3;UBERON:0006915,5.28e-12,3;UBERON:0007616,5.28e-12,3;UBERON:0002217,5.28e-12,3;UBERON:0002018,5.28e-12,3;UBERON:0001282,1.36e-09,1;UBERON:0009842,1.36e-09,1;UBERON:0003704,1.36e-09,1;UBERON:0001171,1.36e-09,1;UBERON:0001172,1.36e-09,1;UBERON:0002363,1.91e-09,1;UBERON:0007645,1.91e-09,1;UBERON:0007647,1.91e-09,1;UBERON:0010115,1.91e-09,1;UBERON:0002384,2.61e-07,371;UBERON:0002107,2.81e-07,19;UBERON:0006925,2.81e-07,19;UBERON:0008836,2.81e-07,19 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,9.02408239144601,3.33146993609895,31.0161519349929,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,2.57404691653161,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,5.9832291840805,0,0,0,0,0,0,0,0,0,4.5481500811197,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01104507065562,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.894704431569664,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,2.27884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0.410716136675979,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,3.81035807563014,0,0,0.26446520348538,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0,0,0,0,0,0.554805861502613,1.89403005275089,6.54076544556695,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28720023593546,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,2.97596014533401,16.1761470020996,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@CHI3L1 | |short_description=p12@CHI3L1 | ||
}} | }} |
Latest revision as of 22:07, 19 September 2015
Short description: | p12@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CHI3L1_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | -1bp_to_uc001gzl.3_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.31e-44 | 9 |
carbohydrate secreting cell | 1.31e-44 | 9 |
chondroblast | 8.04e-35 | 6 |
chondrocyte | 8.04e-35 | 6 |
extracellular matrix secreting cell | 1.61e-26 | 15 |
stromal cell | 6.18e-23 | 28 |
macrophage | 2.72e-22 | 6 |
mesenchymal stem cell of the bone marrow | 4.49e-13 | 6 |
fibrocyte | 2.27e-12 | 3 |
tendon cell | 2.27e-12 | 3 |
synovial cell | 5.28e-12 | 3 |
secretory cell | 1.25e-10 | 36 |
bone marrow cell | 4.76e-08 | 10 |
mesenchymal cell | 7.70e-08 | 354 |
connective tissue cell | 1.29e-07 | 361 |
hepatocyte | 7.48e-07 | 12 |
motile cell | 8.00e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.27e-12 | 3 |
tendon | 2.27e-12 | 3 |
regular connective tissue | 2.27e-12 | 3 |
stratified squamous epithelium | 5.28e-12 | 3 |
layer of synovial tissue | 5.28e-12 | 3 |
synovial joint | 5.28e-12 | 3 |
synovial membrane of synovial joint | 5.28e-12 | 3 |
intralobular bile duct | 1.36e-09 | 1 |
acinus | 1.36e-09 | 1 |
intrahepatic bile duct | 1.36e-09 | 1 |
portal lobule | 1.36e-09 | 1 |
hepatic acinus | 1.36e-09 | 1 |
dura mater | 1.91e-09 | 1 |
future meninx | 1.91e-09 | 1 |
ectomeninx | 1.91e-09 | 1 |
future dura mater | 1.91e-09 | 1 |
connective tissue | 2.61e-07 | 371 |
liver | 2.81e-07 | 19 |
digestive gland | 2.81e-07 | 19 |
liver bud | 2.81e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.31e-10 | 1 |