FFCP PHASE1:Hg19::chr4:8296194..8296199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:8296194..8296199,+ | |||
|description=CAGE_peak_at_chr4:8296194..8296199,+ | |description=CAGE_peak_at_chr4:8296194..8296199,+ | ||
|id=chr4:8296194..8296199,+ | |id=chr4:8296194..8296199,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;3.71e-14;6!CL:0000135;6.56e-08;3!CL:0000388;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,3.25e-14,6;CL:0000135,5.18e-08,3;CL:0000388,5.18e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.66e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;3.71e-14;6!UBERON:0003104;2.81e-12;7!UBERON:0009142;2.81e-12;7!UBERON:0002331;7.07e-09;10!UBERON:0007846;6.56e-08;3!UBERON:0000043;6.56e-08;3!UBERON:0007845;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,3.25e-14,6;UBERON:0002331,6.54e-09,10;UBERON:0000358,6.54e-09,10;UBERON:0000307,6.54e-09,10;UBERON:0000091,6.54e-09,10;UBERON:0000087,6.54e-09,10;UBERON:0007010,6.54e-09,10;UBERON:0007806,6.54e-09,10;UBERON:0008780,6.54e-09,10;UBERON:0005728,6.54e-09,10;UBERON:0007846,5.18e-08,3;UBERON:0000043,5.18e-08,3;UBERON:0007845,5.18e-08,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,1.54853185447552,0,0,0,0,1.29096936716765,0,0,2.18324920046277,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,1.62786481617433,0,0,0,1.58390374586686,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0.191505370132367,4.44514523720154,0.324621940274555,0,0.456469358066384,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,0,0,1.41085292222125,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,1.10043013569766,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,1.71603825227734,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,1.73050624849516,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,1.54853185447552,0,0,0,0,1.29096936716765,0,0,2.18324920046277,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.243947412259191,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,1.62786481617433,0,0,0,1.58390374586686,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59873811429845,0.191505370132367,4.44514523720154,0.324621940274555,0,0.456469358066384,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,0,0,1.41085292222125,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,1.10043013569766,0.414239055347196,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,1.71603825227734,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.462175628631418,1.73050624849516,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr4:8296194..8296199,+ | |short_description=p@chr4:8296194..8296199,+ | ||
}} | }} |
Latest revision as of 07:25, 30 July 2015
Short description: | p@chr4:8296194..8296199, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8296194..8296199, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 3.25e-14 | 6 |
fibrocyte | 5.18e-08 | 3 |
tendon cell | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 3.25e-14 | 6 |
umbilical cord | 6.54e-09 | 10 |
blastocyst | 6.54e-09 | 10 |
blastula | 6.54e-09 | 10 |
bilaminar disc | 6.54e-09 | 10 |
inner cell mass | 6.54e-09 | 10 |
cleaving embryo | 6.54e-09 | 10 |
connecting stalk | 6.54e-09 | 10 |
inner cell mass derived epiblast | 6.54e-09 | 10 |
extraembryonic mesoderm | 6.54e-09 | 10 |
dense regular connective tissue | 5.18e-08 | 3 |
tendon | 5.18e-08 | 3 |
regular connective tissue | 5.18e-08 | 3 |