FFCP PHASE1:Hg19::chr12:68383182..68383195,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:68383182..68383195,+
|short_description=p2@ENST00000538665,p2@uc001stv.1
|description=CAGE_peak_2_at_ENST00000538665_5end,CAGE_peak_2_at_uc001stv.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000538665,uc001stv.1_5end | |||
|cluster_id=chr12:68383182..68383195,+ | |||
|coexpression_cluster_id=C3320 | |||
|description=CAGE_peak_2_at_ENST00000538665_5end,CAGE_peak_2_at_uc001stv.1_5end | |||
|id=chr12:68383182..68383195,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.78e-67!53;CL:0000051!4.78e-67!53;CL:0000838!1.20e-64!52;CL:0000945!2.78e-43!24;CL:0000826!2.78e-43!24;CL:0000236!6.81e-33!14;CL:0000791!5.48e-31!18;CL:0000789!5.48e-31!18;CL:0002420!5.48e-31!18;CL:0002419!5.48e-31!18;CL:0000790!5.48e-31!18;CL:0002087!4.98e-30!119;CL:0000625!7.68e-29!11;CL:0000738!1.07e-26!140;CL:0002031!1.34e-23!124;CL:0000084!3.47e-21!25;CL:0000827!3.47e-21!25;CL:0000037!1.40e-19!172;CL:0000566!1.40e-19!172;CL:0002032!1.80e-18!165;CL:0000837!1.80e-18!165;CL:0000988!7.04e-18!182;CL:0000624!3.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.80e-73;13!CL:0000945;1.53e-63;24!CL:0000542;8.61e-40;53!CL:0000625;9.70e-18;11!CL:0000791;2.88e-15;18!CL:0000789;2.88e-15;18!CL:0002419;2.88e-15;18!CL:0000084;7.20e-11;25!CL:0002087;3.89e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.76e-68,14;CL:0000945,6.42e-64,24;CL:0000826,6.42e-64,24;CL:0000838,2.93e-58,52;CL:0000542,4.23e-57,53;CL:0000051,4.23e-57,53;CL:0002087,2.83e-24,115;CL:0002031,3.94e-23,120;CL:0000738,5.00e-20,136;CL:0000625,1.44e-17,11;CL:0002032,2.12e-16,161;CL:0000837,2.12e-16,161;CL:0000037,1.41e-15,168;CL:0000791,4.02e-15,18;CL:0000789,4.02e-15,18;CL:0002420,4.02e-15,18;CL:0002419,4.02e-15,18;CL:0000790,4.02e-15,18;CL:0000988,1.31e-14,177;CL:0000084,9.11e-11,25;CL:0000827,9.11e-11,25 | |||
|ontology_enrichment_development_v019=CL:0000051;8.61e-40;53!CL:0000790;2.88e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.72e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.59e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.43e-09!7;UBERON:0002771!9.44e-08!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@ENST00000538665,p2@uc001stv.1 | |||
}} | }} |
Latest revision as of 11:39, 24 July 2015
Short description: | p2@ENST00000538665, p2@uc001stv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000538665_5end, CAGE_peak_2_at_uc001stv.1_5end |
Coexpression cluster: | C3320_lymphoma_CD19_CD4_myeloma_Burkitt_CD8_hereditary |
Association with transcript: | -29bp_to_ENST00000538665, uc001stv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.76e-68 | 14 |
lymphocyte of B lineage | 6.42e-64 | 24 |
pro-B cell | 6.42e-64 | 24 |
lymphoid lineage restricted progenitor cell | 2.93e-58 | 52 |
lymphocyte | 4.23e-57 | 53 |
common lymphoid progenitor | 4.23e-57 | 53 |
nongranular leukocyte | 2.83e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 3.94e-23 | 120 |
leukocyte | 5.00e-20 | 136 |
CD8-positive, alpha-beta T cell | 1.44e-17 | 11 |
hematopoietic oligopotent progenitor cell | 2.12e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-16 | 161 |
hematopoietic stem cell | 1.41e-15 | 168 |
mature alpha-beta T cell | 4.02e-15 | 18 |
alpha-beta T cell | 4.02e-15 | 18 |
immature T cell | 4.02e-15 | 18 |
mature T cell | 4.02e-15 | 18 |
immature alpha-beta T cell | 4.02e-15 | 18 |
hematopoietic cell | 1.31e-14 | 177 |
T cell | 9.11e-11 | 25 |
pro-T cell | 9.11e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.59e-08 | 10 |