FFCP PHASE1:Hg19::chr12:6960128..6960147,-: Difference between revisions
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|id=chr12:6960128..6960147,-
|short_description=p5@CDCA3
|description=CAGE_peak_5_at_CDCA3_5end
|association_with_transcript=274bp_to_ENST00000535406_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83461 | |EntrezGene=83461 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14624 | |HGNC=14624 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=274bp_to_ENST00000535406_5end | |||
|cluster_id=chr12:6960128..6960147,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_5_at_CDCA3_5end | |||
|id=chr12:6960128..6960147,- | |||
|ontology_enrichment_celltype=CL:0000055!6.23e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002563;2.08e-25;4!CL:0002253;1.37e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.84e-25,4;CL:0002253,1.37e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.17e-49;17!UBERON:0002108;2.20e-45;4!UBERON:0005409;9.66e-39;22!UBERON:0001242;2.08e-25;4!UBERON:0001262;2.08e-25;4!UBERON:0004786;2.08e-25;4!UBERON:0004808;2.08e-25;4!UBERON:0001277;2.08e-25;4!UBERON:0004921;1.00e-23;33!UBERON:0000485;5.41e-15;7!UBERON:0003929;5.41e-15;7!UBERON:0003350;3.00e-13;8!UBERON:0001155;5.52e-12;9!UBERON:0001555;7.47e-11;54!UBERON:0000059;5.54e-10;11!UBERON:0002114;1.19e-09;2!UBERON:0001007;1.35e-07;81!UBERON:0001052;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-49,17;UBERON:0002108,2.20e-45,4;UBERON:0005409,2.44e-34,25;UBERON:0001242,1.84e-25,4;UBERON:0001262,1.84e-25,4;UBERON:0004786,1.84e-25,4;UBERON:0004808,1.84e-25,4;UBERON:0001277,1.84e-25,4;UBERON:0003350,2.82e-13,8;UBERON:0001155,5.52e-12,9;UBERON:0000485,6.51e-12,9;UBERON:0000059,5.54e-10,11;UBERON:0002114,1.30e-09,2;UBERON:0004921,1.33e-07,118;UBERON:0001052,1.92e-07,4 | |||
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| ||
|short_description=p5@CDCA3 | |||
}} | }} |
Latest revision as of 05:01, 20 September 2015
Short description: | p5@CDCA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CDCA3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 274bp_to_ENST00000535406_5end |
EntrezGene: | CDCA3 |
HGNC: | 14624 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.84e-25 | 4 |
epithelial cell of large intestine | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.99e-49 | 17 |
small intestine | 2.20e-45 | 4 |
gastrointestinal system | 2.44e-34 | 25 |
intestinal mucosa | 1.84e-25 | 4 |
wall of intestine | 1.84e-25 | 4 |
gastrointestinal system mucosa | 1.84e-25 | 4 |
gastrointestinal system epithelium | 1.84e-25 | 4 |
intestinal epithelium | 1.84e-25 | 4 |
epithelium of mucosa | 2.82e-13 | 8 |
colon | 5.52e-12 | 9 |
simple columnar epithelium | 6.51e-12 | 9 |
large intestine | 5.54e-10 | 11 |
duodenum | 1.30e-09 | 2 |
subdivision of digestive tract | 1.33e-07 | 118 |
rectum | 1.92e-07 | 4 |