FFCP PHASE1:Hg19::chr5:20575778..20575783,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1016 | |EntrezGene=1016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1757 | |HGNC=1757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=188bp_to_ENST00000507632_5end | |association_with_transcript=188bp_to_ENST00000507632_5end | ||
|cluster_id=chr5:20575778..20575783,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_15_at_CDH18_5end | |description=CAGE_peak_15_at_CDH18_5end | ||
|id=chr5:20575778..20575783,- | |id=chr5:20575778..20575783,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.04e-59!57;UBERON:0005068!2.04e-59!57;UBERON:0006241!2.04e-59!57;UBERON:0007135!2.04e-59!57;UBERON:0002616!5.63e-51!59;UBERON:0003076!2.95e-46!15;UBERON:0003057!2.95e-46!15;UBERON:0004733!1.71e-44!12;UBERON:0002028!1.71e-44!12;UBERON:0007277!1.71e-44!12;UBERON:0000955!8.83e-43!69;UBERON:0006238!8.83e-43!69;UBERON:0004732!4.88e-41!13;UBERON:0001017!1.98e-40!82;UBERON:0003075!5.75e-39!86;UBERON:0007284!5.75e-39!86;UBERON:0005743!1.68e-38!86;UBERON:0002346!3.63e-37!90;UBERON:0000073!9.61e-35!94;UBERON:0001016!9.61e-35!94;UBERON:0002298!4.54e-34!8;UBERON:0000988!8.46e-34!3;UBERON:0001950!8.00e-33!20;UBERON:0002680!4.22e-31!9;UBERON:0001895!4.22e-31!9;UBERON:0010092!4.22e-31!9;UBERON:0002020!2.57e-30!34;UBERON:0003528!2.57e-30!34;UBERON:0002619!6.62e-30!22;UBERON:0000200!1.55e-29!6;UBERON:0007023!5.48e-29!115;UBERON:0000956!2.28e-26!25;UBERON:0000203!2.28e-26!25;UBERON:0001869!5.89e-26!32;UBERON:0002780!5.68e-25!41;UBERON:0001890!5.68e-25!41;UBERON:0006240!5.68e-25!41;UBERON:0001893!2.04e-24!34;UBERON:0003080!2.31e-24!42;UBERON:0000033!2.00e-23!123;UBERON:0002148!2.79e-23!2;UBERON:0009662!2.79e-23!2;UBERON:0001871!1.73e-22!7;UBERON:0000153!2.96e-22!129;UBERON:0007811!2.96e-22!129;UBERON:0002791!5.60e-20!33;UBERON:0004121!1.11e-18!169;UBERON:0000924!3.32e-18!173;UBERON:0006601!3.32e-18!173;UBERON:0003056!1.64e-16!61;UBERON:0000025!3.23e-16!194;UBERON:0006331!7.27e-16!3;UBERON:0002771!9.80e-16!3;UBERON:0001896!2.56e-15!3;UBERON:0005290!2.56e-15!3;UBERON:0010096!2.56e-15!3;UBERON:0004111!1.25e-12!241;UBERON:0002581!1.57e-12!1;UBERON:0002902!3.85e-12!1;UBERON:0009899!3.85e-12!1;UBERON:0007190!4.31e-12!1;UBERON:0000064!9.93e-11!219;UBERON:0000477!2.77e-10!286;UBERON:0001872!5.95e-10!5;UBERON:0000483!2.41e-09!309;UBERON:0000119!3.12e-09!312;UBERON:0002037!1.34e-08!6;UBERON:0006215!1.34e-08!6;UBERON:0000475!1.63e-07!365;UBERON:0001876!5.41e-07!2;UBERON:0001870!7.61e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;3.43e-07;53!UBERON:0002616;3.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p15@CDH18 | |short_description=p15@CDH18 | ||
}} | }} |
Latest revision as of 12:55, 17 September 2015
Short description: | p15@CDH18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CDH18_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 188bp_to_ENST00000507632_5end |
EntrezGene: | CDH18 |
HGNC: | 1757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |