FFCP PHASE1:Hg19::chr1:41131106..41131117,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9783 | |EntrezGene=9783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21292 | |HGNC=21292 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJD0 | |UniProt=Q9UJD0 | ||
|association_with_transcript=0bp_to_ENST00000372683_5end | |association_with_transcript=0bp_to_ENST00000372683_5end | ||
|cluster_id=chr1:41131106..41131117,- | |||
|description=CAGE_peak_4_at_RIMS3_5end | |description=CAGE_peak_4_at_RIMS3_5end | ||
|id=chr1:41131106..41131117,- | |id=chr1:41131106..41131117,- | ||
|ontology_enrichment_celltype=CL:0002322!6.89e-09!5;CL:0000242!3.39e-07!2 | |ontology_enrichment_celltype=CL:0002322!6.89e-09!5;CL:0000242!3.39e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.81e-40;1!CL:0000945;1.13e-15;24!CL:0000784;1.71e-14;3!CL:0002569;6.55e-08;6!CL:0000542;4.57e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000817,1.60e-14,3;CL:0000784,2.09e-14,3;CL:0002569,6.78e-08,6;CL:0000838,1.10e-07,52;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;4.57e-07;53 | |||
|ontology_enrichment_disease=DOID:169!5.30e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.81e-40;1!DOID:0070004;1.81e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,9.91e-41,1;DOID:0070004,9.91e-41,1;DOID:2531,8.01e-08,51;DOID:0060083,8.01e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0001950!6.47e-21!20;UBERON:0001869!4.20e-19!32;UBERON:0002619!8.19e-19!22;UBERON:0001893!9.02e-18!34;UBERON:0000956!2.86e-16!25;UBERON:0000203!2.86e-16!25;UBERON:0002791!4.58e-16!33;UBERON:0002780!4.59e-16!41;UBERON:0001890!4.59e-16!41;UBERON:0006240!4.59e-16!41;UBERON:0003080!1.37e-15!42;UBERON:0002020!1.70e-15!34;UBERON:0003528!1.70e-15!34;UBERON:0000073!2.25e-13!94;UBERON:0001016!2.25e-13!94;UBERON:0000200!5.63e-12!6;UBERON:0001049!8.98e-12!57;UBERON:0005068!8.98e-12!57;UBERON:0006241!8.98e-12!57;UBERON:0007135!8.98e-12!57;UBERON:0000955!2.72e-11!69;UBERON:0006238!2.72e-11!69;UBERON:0002616!3.13e-11!59;UBERON:0001017!5.04e-11!82;UBERON:0005743!2.83e-10!86;UBERON:0000013!1.32e-09!5;UBERON:0002410!1.32e-09!5;UBERON:0003056!1.67e-09!61;UBERON:0001871!2.16e-08!7;UBERON:0007023!3.08e-08!115;UBERON:0001870!2.02e-07!2;UBERON:0003075!2.90e-07!86;UBERON:0007284!2.90e-07!86;UBERON:0004121!8.55e-07!169;UBERON:0002346!9.32e-07!90 | |ontology_enrichment_uberon=UBERON:0001950!6.47e-21!20;UBERON:0001869!4.20e-19!32;UBERON:0002619!8.19e-19!22;UBERON:0001893!9.02e-18!34;UBERON:0000956!2.86e-16!25;UBERON:0000203!2.86e-16!25;UBERON:0002791!4.58e-16!33;UBERON:0002780!4.59e-16!41;UBERON:0001890!4.59e-16!41;UBERON:0006240!4.59e-16!41;UBERON:0003080!1.37e-15!42;UBERON:0002020!1.70e-15!34;UBERON:0003528!1.70e-15!34;UBERON:0000073!2.25e-13!94;UBERON:0001016!2.25e-13!94;UBERON:0000200!5.63e-12!6;UBERON:0001049!8.98e-12!57;UBERON:0005068!8.98e-12!57;UBERON:0006241!8.98e-12!57;UBERON:0007135!8.98e-12!57;UBERON:0000955!2.72e-11!69;UBERON:0006238!2.72e-11!69;UBERON:0002616!3.13e-11!59;UBERON:0001017!5.04e-11!82;UBERON:0005743!2.83e-10!86;UBERON:0000013!1.32e-09!5;UBERON:0002410!1.32e-09!5;UBERON:0003056!1.67e-09!61;UBERON:0001871!2.16e-08!7;UBERON:0007023!3.08e-08!115;UBERON:0001870!2.02e-07!2;UBERON:0003075!2.90e-07!86;UBERON:0007284!2.90e-07!86;UBERON:0004121!8.55e-07!169;UBERON:0002346!9.32e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;6.55e-08;6!UBERON:0003104;5.86e-07;7!UBERON:0009142;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,6.78e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,2.94375362205146,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,1.15415370381156,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.364497339948148,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,1.20550485762571,0,0,0,0,0.127894371303652,0.862598491173454,0.471797825567689,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0,0.449604575675217,0,0,0.41023272848151,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,2.94375362205146,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,1.15415370381156,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0.343189995723929,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.364497339948148,0,0,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0.936669811613763,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,1.20550485762571,0,0,0,0,0.127894371303652,0.862598491173454,0.471797825567689,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0,0.449604575675217,0,0,0.41023272848151,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0.657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@RIMS3 | |short_description=p4@RIMS3 | ||
}} | }} |
Latest revision as of 01:47, 18 September 2015
Short description: | p4@RIMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RIMS3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372683_5end |
EntrezGene: | RIMS3 |
HGNC: | 21292 |
UniProt: | Q9UJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
precursor B cell | 1.60e-14 | 3 |
plasmacytoid dendritic cell | 2.09e-14 | 3 |
mesenchymal stem cell of umbilical cord | 6.78e-08 | 6 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 9.91e-41 | 1 |
myeloma | 9.91e-41 | 1 |
hematologic cancer | 8.01e-08 | 51 |
immune system cancer | 8.01e-08 | 51 |