FFCP PHASE1:Hg19::chr1:47603109..47603120,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284541 | |EntrezGene=284541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20575 | |HGNC=20575 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCH5 | |UniProt=Q5TCH5 | ||
|association_with_transcript=-1bp_to_ENST00000371890_5end | |association_with_transcript=-1bp_to_ENST00000371890_5end | ||
|cluster_id=chr1:47603109..47603120,+ | |||
|coexpression_cluster_id=C1469 | |||
|description=CAGE_peak_1_at_CYP4A22_5end | |description=CAGE_peak_1_at_CYP4A22_5end | ||
|id=chr1:47603109..47603120,+ | |id=chr1:47603109..47603120,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.52e-07!12;CL:0000417!1.52e-07!12;CL:0000668!1.52e-07!12;CL:0000414!1.52e-07!12;CL:0000412!1.52e-07!12;CL:0000182!1.52e-07!12 | |ontology_enrichment_celltype=CL:0000181!1.52e-07!12;CL:0000417!1.52e-07!12;CL:0000668!1.52e-07!12;CL:0000414!1.52e-07!12;CL:0000412!1.52e-07!12;CL:0000182!1.52e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.46e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13!UBERON:0003104;3.18e-09;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.31e-21!1;UBERON:0005172!2.16e-17!55;UBERON:0005173!2.16e-17!55;UBERON:0002107!4.09e-17!19;UBERON:0006925!4.09e-17!19;UBERON:0008836!4.09e-17!19;UBERON:0002417!1.15e-15!61;UBERON:0000916!1.15e-15!61;UBERON:0008835!7.70e-15!22;UBERON:0003894!7.70e-15!22;UBERON:0009854!3.26e-14!23;UBERON:0007499!4.15e-13!25;UBERON:0009497!4.15e-13!25;UBERON:0000015!4.15e-13!25;UBERON:0002423!4.15e-13!25;UBERON:0006235!4.15e-13!25;UBERON:0004161!4.15e-13!25;UBERON:0005057!1.28e-12!26;UBERON:0009856!1.28e-12!26;UBERON:0002365!1.21e-10!31;UBERON:0002330!1.21e-10!31;UBERON:0002368!1.82e-09!35;UBERON:0005177!7.98e-09!107;UBERON:0009569!2.44e-08!113;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3;UBERON:0000949!1.98e-07!45;UBERON:0002113!3.44e-07!27;UBERON:0003918!3.44e-07!27;UBERON:0005095!3.44e-07!27;UBERON:0007687!3.44e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.62e-24;19!UBERON:0006925;3.62e-24;19!UBERON:0002423;1.60e-18;25!UBERON:0002365;6.75e-15;31!UBERON:0002330;6.75e-15;31!UBERON:0002368;1.57e-12;33!UBERON:0005172;1.23e-10;52!UBERON:0005173;1.23e-10;52!UBERON:0000949;4.25e-09;43!UBERON:0002417;1.21e-07;58!UBERON:0000916;1.21e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.73e-24,19;UBERON:0006925,3.73e-24,19;UBERON:0008836,3.73e-24,19;UBERON:0008835,5.98e-21,22;UBERON:0003894,5.98e-21,22;UBERON:0009854,4.57e-20,23;UBERON:0007499,1.64e-18,25;UBERON:0009497,1.64e-18,25;UBERON:0000015,1.64e-18,25;UBERON:0002423,1.64e-18,25;UBERON:0006235,1.64e-18,25;UBERON:0004161,1.64e-18,25;UBERON:0009856,8.02e-18,26;UBERON:0002365,4.84e-15,31;UBERON:0002330,4.84e-15,31;UBERON:0005172,2.18e-13,54;UBERON:0005173,2.18e-13,54;UBERON:0002368,2.19e-13,35;UBERON:0002417,4.38e-12,60;UBERON:0000916,4.38e-12,60;UBERON:0000949,1.59e-10,45;UBERON:0003929,7.58e-09,54;UBERON:0002530,3.92e-08,59;UBERON:0005177,2.72e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23103399926713,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27588041241097,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87333766392017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23103399926713,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27588041241097,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@CYP4A22 | |short_description=p1@CYP4A22 | ||
}} | }} |
Latest revision as of 09:44, 18 September 2015
Short description: | p1@CYP4A22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP4A22_5end |
Coexpression cluster: | C1469_kidney_amniotic_liver_Hepatocyte_Placental_Amniotic_tongue |
Association with transcript: | -1bp_to_ENST00000371890_5end |
EntrezGene: | CYP4A22 |
HGNC: | 20575 |
UniProt: | Q5TCH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.73e-24 | 19 |
digestive gland | 3.73e-24 | 19 |
liver bud | 3.73e-24 | 19 |
hepatic diverticulum | 5.98e-21 | 22 |
liver primordium | 5.98e-21 | 22 |
digestive tract diverticulum | 4.57e-20 | 23 |
epithelial sac | 1.64e-18 | 25 |
epithelium of foregut-midgut junction | 1.64e-18 | 25 |
anatomical boundary | 1.64e-18 | 25 |
hepatobiliary system | 1.64e-18 | 25 |
foregut-midgut junction | 1.64e-18 | 25 |
septum transversum | 1.64e-18 | 25 |
sac | 8.02e-18 | 26 |
exocrine gland | 4.84e-15 | 31 |
exocrine system | 4.84e-15 | 31 |
abdomen element | 2.18e-13 | 54 |
abdominal segment element | 2.18e-13 | 54 |
endocrine gland | 2.19e-13 | 35 |
abdominal segment of trunk | 4.38e-12 | 60 |
abdomen | 4.38e-12 | 60 |
endocrine system | 1.59e-10 | 45 |
gut epithelium | 7.58e-09 | 54 |
gland | 3.92e-08 | 59 |
trunk region element | 2.72e-07 | 101 |